RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 NOVA1P51513 510 aaKnown RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 RPS14P62263 151 aaKnown RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 DEUP1Q05D60 604 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 BRMS1LQ5PSV4 323 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 RABGAP1LQ5R372 815 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 TTC39BQ5VTQ0 682 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 CCDC117Q8IWD4 279 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 ZNF683Q8IZ20 524 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 JOSD2Q8TAC2 188 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 CEP76Q8TAP6 659 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 ALG14Q96F25 216 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 RPL10LQ96L21 214 aaKnown RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 GTPBP2Q9BX10 602 aaKnown RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 SLCO3A1Q9UIG8 710 aa14.87□□□□□ -0.03
HMGN3-201ENST00000275036 TP53BP1Q12888 1972 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 TPRP12270 2363 aaKnown RBP14.87□□□□□ -0.03
HMGN3-201ENST00000275036 ASPMQ8IZT6 3477 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 SYCE3A1L190 88 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 SMTNL1A8MU46 457 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 METTL12A8MUP2 240 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 SIN3BO75182 1162 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ACADMP11310 421 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ECT2LQ008S8 904 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 BNC1Q01954 994 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 CLEC16AQ2KHT3 1053 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ALFQ53S48 1182 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 TRIM72Q6ZMU5 477 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ARCQ7LC44 396 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 RGL4Q8IZJ4 473 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ZCCHC9Q8N567 271 aaKnown RBP14.86□□□□□ -0.03
HMGN3-201ENST00000275036 MINDY1Q8N5J2 469 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 DEFB124Q8NES8 71 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 DNASE2BQ8WZ79 361 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 BAP1Q92560 729 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 FOXJ1Q92949 421 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 NAP1L5Q96NT1 182 aaPredicted RBP14.86□□□□□ -0.03
HMGN3-201ENST00000275036 C6orf106Q9H6K1 298 aaPredicted RBP14.86□□□□□ -0.03
HMGN3-201ENST00000275036 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 OR51B4Q9Y5P0 310 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 EPG5Q9HCE0 2579 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 ITIH6Q6UXX5 1313 aa14.86□□□□□ -0.03
HMGN3-201ENST00000275036 CEP295Q9C0D2 2601 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 PLXNA2O75051 1894 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 TMEM131Q92545 1883 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 MEI4A8MW99 385 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 ARHGAP33O14559 1287 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 GJB3O75712 270 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 ENDOD1O94919 500 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 MOCS3O95396 460 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 F9P00740 461 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 SRPRAP08240 638 aaKnown RBP14.85□□□□□ -0.03
HMGN3-201ENST00000275036 CSRP1P21291 193 aaKnown RBP14.85□□□□□ -0.03
HMGN3-201ENST00000275036 PLK1P53350 603 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 ST8SIA6P61647 398 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 ATP11AP98196 1134 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-201ENST00000275036 SEMA3BQ13214 749 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 MTA1Q13330 715 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 SLC12A1Q13621 1099 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-201ENST00000275036 CCDC14Q49A88 953 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 IRF2BP2Q7Z5L9 587 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 PIP4P1Q86T03 277 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 FAM131BQ86XD5 332 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 KDM1BQ8NB78 822 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 C1orf216Q8TAB5 229 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 AGPAT1Q99943 283 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 FEM1AQ9BSK4 669 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 SYT11Q9BT88 431 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 RSPH9Q9H1X1 276 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-201ENST00000275036 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 WASF3Q9UPY6 502 aa14.85□□□□□ -0.03
HMGN3-201ENST00000275036 MAP1BP46821 2468 aaKnown RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 KMT2BQ9UMN6 2715 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 A0A1B0GTH6 734 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 C2CD4BA6NLJ0 364 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 DRGXA6NNA5 263 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 CLDN11O75508 207 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 TOP3BO95985 862 aaKnown RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 CD59P13987 128 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 VAV1P15498 845 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 OXTRP30559 389 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 NSFP46459 744 aaKnown RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 CDH4P55283 916 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 GSCP56915 257 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 ZNF252P-AS1Q0IIN9 211 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 GRIK2Q13002 908 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms