RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MREGQ8N565 214 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MROH8Q9H579 483 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RNF181Q9P0P0 153 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CRYL1Q9Y2S2 319 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 BTNL10A8MVZ5 291 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF549Q6P9A3 640 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CLVS1Q8IUQ0 354 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 COLGALT1Q8NBJ5 622 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 TSPAN14Q8NG11 270 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RDH11Q8TC12 318 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MCOLN3Q8TDD5 553 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 NARS2Q96I59 477 aaKnown RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ACOX2Q99424 681 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RNPEPL1Q9HAU8 725 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CLN6Q9NWW5 311 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 HACL1Q9UJ83 578 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF112Q9UJU3 913 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RHOCP08134 193 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ITGA2P17301 1181 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 OR1G1P47890 313 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ATP12AP54707 1039 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 LYPLAL1Q5VWZ2 237 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 FBXO25Q8TCJ0 367 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 PANX3Q96QZ0 392 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 SEMA6BQ9H3T3 888 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 KLHL1Q9NR64 748 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 LIMD1Q9UGP4 676 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MGRN1O60291 552 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF7P17097 686 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GJB7Q6PEY0 223 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 USP7Q93009 1102 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 SPATA5L1Q9BVQ7 753 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ENTPD4Q9Y227 616 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 SPAG17Q6Q759 2223 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ELK3P41970 407 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 FAXCQ5TGI0 409 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 NIPA1Q7RTP0 329 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 TPD52L3Q96J77 140 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 PNMA8BQ9ULN7 279 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 POLR1DQ9Y2S0 133 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 NRXN1Q9ULB1 1477 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CCNT2O60583 730 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF24P17028 368 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RAB25P57735 213 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 LIN54Q6MZP7 749 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF276Q8N554 614 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 OR7A2PQ8NGA2 310 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ATL1Q8WXF7 558 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 PPP1R14AQ96A00 147 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM159Q96B96 161 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 SERPINB11Q96P15 392 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CDH9Q9ULB4 789 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 AHCYL1O43865 530 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 S100GP29377 79 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MACC1Q6ZN28 852 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 DSG4Q86SJ6 1040 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ZDHHC15Q96MV8 337 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 SLC38A2Q96QD8 506 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 IL22Q9GZX6 179 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MAGEC1O60732 1142 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MED24O75448 989 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RGS20O76081 388 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ADSSP30520 456 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 BHLHE22Q8NFJ8 381 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC189A1A4V9 331 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 KPNA5O15131 536 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 OR56A5P0C7T3 313 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RCVRNP35243 200 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 EFEMP1Q12805 493 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 BHLHB9Q6PI77 547 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF720Q7Z2F6 126 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 SNX32Q86XE0 403 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 UXS1Q8NBZ7 420 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM106CQ9BVX2 250 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 OSBPL11Q9BXB4 747 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 H3BN98 237 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 RRM1P23921 792 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 S100A3P33764 101 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MARK2Q7KZI7 788 aaKnown RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 GPSM1Q86YR5 675 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 TCP10LQ8TDR4 215 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 CATSPERZQ9NTU4 200 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ING3Q9NXR8 418 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 ERCC6L2Q5T890 1561 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 BTN3A3O00478 584 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 MTA2O94776 668 aa8.11□□□□□ -1.11
LIMD1-201ENST00000273317 PCBP1Q15365 356 aaKnown RBP eCLIP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 NAIF1Q69YI7 327 aaPredicted RBP8.11□□□□□ -1.11
LIMD1-201ENST00000273317 OLFML1Q6UWY5 402 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms