RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 A0A087WUV0 522 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 TCRBV7S3A2A0A539 114 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 HIDE1A8MVS5 230 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 E9PAM4 449 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 H3BQ06 376 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 RASGRF2O14827 1237 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 PER2O15055 1255 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 LINC01565O15544 149 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 TLR5O60602 858 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 SEC24AO95486 1093 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 AGTP01019 485 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 ALDH1A3P47895 512 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 NRLP54845 237 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 DLX2Q07687 328 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 AP1B1Q10567 949 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 EFEMP1Q12805 493 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 PDIA2Q13087 525 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 TNFAIP8L3Q5GJ75 292 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 C10orf120Q5SQS8 335 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 NUGGCQ68CJ6 796 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 B4GALNT4Q76KP1 1039 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 RIBC1Q8N443 379 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 ARFGAP2Q8N6H7 521 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 ATP11CQ8NB49 1132 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 GIPC2Q8TF65 315 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 TSGA13Q96PP4 275 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 CDCA3Q99618 268 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 ETNK1Q9HBU6 452 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 DNAJC17Q9NVM6 304 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 FETUBQ9UGM5 382 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 TRHDEQ9UKU6 1024 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 IGLV3-10A0A075B6K4 115 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 RNF103O00237 685 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 C2CD2LO14523 706 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 TBX10O75333 385 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 SPAG6O75602 509 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 CTSAP10619 480 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 MLNP12872 115 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 HMGA1P17096 107 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 PHBP35232 272 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 MAGEA3P43357 314 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 SARNPP82979 210 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 SKOR1P84550 965 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 WASHC5Q12768 1159 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 PLD1Q13393 1074 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 VEPH1Q14D04 833 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 RASA2Q15283 850 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 TERF2Q15554 542 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 DUSP6Q16828 381 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 PARP6Q2NL67 630 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 CCDC38Q502W7 563 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 PIK3R6Q5UE93 754 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 AFMIDQ63HM1 303 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 ZBED8Q8IZ13 594 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 ZNF683Q8IZ20 524 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 RTL3Q8N8U3 475 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 CCNYQ8ND76 341 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 C9orf72Q96LT7 481 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 SIK2Q9H0K1 926 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 CYP4F11Q9HBI6 524 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 XAB2Q9HCS7 855 aaKnown RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 UXTQ9UBK9 157 aaPredicted RBP15.76■□□□□ 0.11
COPS3-201ENST00000268717 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 SNX10Q9Y5X0 201 aa15.76■□□□□ 0.11
COPS3-201ENST00000268717 BDP1A6H8Y1 2624 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 C2orf71A6NGG8 1288 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 E7EVH7 732 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 METTL18O95568 372 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 GLP2RO95838 553 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 NR1D1P20393 614 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 ATP5DP30049 168 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
COPS3-201ENST00000268717 MS4A13Q5J8X5 152 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 FNBP1LQ5T0N5 605 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 UBAP2Q5T6F2 1119 aaKnown RBP15.75■□□□□ 0.11
COPS3-201ENST00000268717 RWDD4Q6NW29 188 aaKnown RBP15.75■□□□□ 0.11
COPS3-201ENST00000268717 LRRC31Q6UY01 552 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 TDRPQ86YL5 185 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 MRPL43Q8N983 215 aaKnown RBP15.75■□□□□ 0.11
COPS3-201ENST00000268717 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 PYROXD1Q8WU10 500 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 FATE1Q969F0 183 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 LRRC4CQ9HCJ2 640 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 LGALS13Q9UHV8 139 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 DNMT3LQ9UJW3 386 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 IRAK3Q9Y616 596 aa15.75■□□□□ 0.11
COPS3-201ENST00000268717 ZNF840PA6NDX5 716 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 GOLGA8MH3BSY2 632 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 RGS16O15492 202 aaPredicted RBP15.74■□□□□ 0.11
COPS3-201ENST00000268717 SRGAP2BP0DMP2 458 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 RHOQP17081 205 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 CCNCP24863 283 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 ELF1P32519 619 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 ATP5C1P36542 298 aaKnown RBP15.74■□□□□ 0.11
COPS3-201ENST00000268717 HECTD3Q5T447 861 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 NLRP14Q86W24 1093 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 ARHGAP12Q8IWW6 846 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms