RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
RTN1-201ENST00000267484 DNAJC1Q96KC8 554 aaKnown RBP17.28■□□□□ 0.36
RTN1-201ENST00000267484 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
RTN1-201ENST00000267484 TCF7L2Q9NQB0 619 aa17.28■□□□□ 0.36
RTN1-201ENST00000267484 KLHL33A6NCF5 533 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 ATP6V1B1P15313 513 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 ALOX15P16050 662 aaPredicted RBP17.27■□□□□ 0.36
RTN1-201ENST00000267484 PMLP29590 882 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 AVPR1AP37288 418 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 ANKRD20A4Q4UJ75 823 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FAM219BQ5XKK7 198 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 CYS1Q717R9 158 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 EXOC8Q8IYI6 725 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 RNF139Q8WU17 664 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 JADE3Q92613 823 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 DCUN1D1Q96GG9 259 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.27■□□□□ 0.36
RTN1-201ENST00000267484 ERAP1Q9NZ08 941 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 KLHL8Q9P2G9 620 aaPredicted RBP17.27■□□□□ 0.36
RTN1-201ENST00000267484 APPL1Q9UKG1 709 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 CITO14578 2027 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FAM72CH0Y354 149 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 MLNP12872 115 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 NDUFV1P49821 464 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 CHN2P52757 468 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 KIZQ2M2Z5 673 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FAM72AQ5TYM5 149 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FAM72DQ6L9T8 149 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 FAM72BQ86X60 149 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 SPATA6LQ8N4H0 392 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 RBBP8Q99708 897 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
RTN1-201ENST00000267484 COPS7BQ9H9Q2 264 aaPredicted RBP17.27■□□□□ 0.36
RTN1-201ENST00000267484 TBC1D30Q9Y2I9 924 aa17.27■□□□□ 0.36
RTN1-201ENST00000267484 MRPL42Q9Y6G3 142 aaKnown RBP17.27■□□□□ 0.36
RTN1-201ENST00000267484 IRF6O14896 467 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 PHGDHO43175 533 aaKnown RBP17.27■□□□□ 0.35
RTN1-201ENST00000267484 C2P06681 752 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 PIK3R1P27986 724 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 SPATA24Q86W54 205 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 GALNT4Q8N4A0 578 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 CNBD2Q96M20 576 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 CATSPER2Q96P56 530 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 GOLGA2P5Q9HBQ8 144 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 KLK14Q9P0G3 267 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 FZD10Q9ULW2 581 aa17.27■□□□□ 0.35
RTN1-201ENST00000267484 CLDN5O00501 218 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CNMDO75829 334 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 ENO3P13929 434 aaPredicted RBP17.26■□□□□ 0.35
RTN1-201ENST00000267484 AKAP5P24588 427 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 ADIGQ0VDE8 80 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 ARMC3Q5W041 872 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 NXNQ6DKJ4 435 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CTU1Q7Z7A3 348 aaKnown RBP17.26■□□□□ 0.35
RTN1-201ENST00000267484 SDCCAG8Q86SQ7 713 aaPredicted RBP17.26■□□□□ 0.35
RTN1-201ENST00000267484 PQLC1Q8N2U9 271 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 RCN3Q96D15 328 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 OTUD5Q96G74 571 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 VCX3BQ9H321 246 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CHRAC1Q9NRG0 131 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CDY1Q9Y6F8 540 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 LGALS2P05162 132 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 ARSAP15289 507 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
RTN1-201ENST00000267484 MS4A2Q01362 244 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 LSM12Q3MHD2 195 aaKnown RBP17.26■□□□□ 0.35
RTN1-201ENST00000267484 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.26■□□□□ 0.35
RTN1-201ENST00000267484 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 SYPL2Q5VXT5 272 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 ARHGAP18Q8N392 663 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CAMKK2Q96RR4 588 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CPNE1Q99829 537 aa17.26■□□□□ 0.35
RTN1-201ENST00000267484 CCDC160A6NGH7 325 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 FBXO21O94952 628 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 PABPC4LP0CB38 370 aaKnown RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 SMIM18P0DKX4 95 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 GARSP41250 739 aaKnown RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 DBN1Q16643 649 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 FSCBQ5H9T9 825 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 IYDQ6PHW0 289 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 IARS2Q9NSE4 1012 aaKnown RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 NUP205Q92621 2012 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 DPP6P42658 865 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 BST2Q10589 180 aaKnown RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 SNAPC2Q13487 334 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 GRM2Q14416 872 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 FAM187BQ17R55 369 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 INSCQ1MX18 579 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 OTUD1Q5VV17 481 aaPredicted RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 PTAR1Q7Z6K3 402 aaPredicted RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 DSELQ8IZU8 1212 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 URGCPQ8TCY9 931 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 NCSTNQ92542 709 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 KCNK16Q96T55 309 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 RTKNQ9BST9 563 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 NMRAL1Q9HBL8 299 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 SPTLC1O15269 473 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms