RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 VTI1BQ9UEU0 232 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 OPLAHO14841 1288 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 GAS2O43903 313 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 MPOP05164 745 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 COPZ1P61923 177 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 CXXC5Q7LFL8 322 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 MB21D2Q8IYB1 491 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 MCFD2Q8NI22 146 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 PIH1D2Q8WWB5 315 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 RASSF5Q8WWW0 418 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 MORF4L1Q9UBU8 362 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 VANGL2Q9ULK5 521 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 NAALADL1Q9UQQ1 740 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 CDK16Q00536 496 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ANKZF1Q9H8Y5 726 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 GPATCH8Q9UKJ3 1502 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 IL18Q14116 193 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 OFCC1Q8IZS5 231 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ZBTB8BQ8NAP8 495 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 CCDC167Q9P0B6 97 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 M0R036 132 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 NPR2P20594 1047 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 MAPK9P45984 424 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 TFDP3Q5H9I0 405 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ACAD10Q6JQN1 1059 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 DRAXINQ8NBI3 349 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 ABI2Q9NYB9 513 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 NKIRAS2Q9NYR9 191 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ASS1P00966 412 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 RAB25P57735 213 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 SLC26A11Q86WA9 606 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 LRRN4CLQ8ND94 238 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ZNF75CPQ92670 426 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 OSGEPL1Q9H4B0 414 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ABCB9Q9NP78 766 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHFR-201ENST00000266880 NPC1L1Q9UHC9 1359 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 PSMD12O00232 456 aaPredicted RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 PLOD2O00469 737 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 FADS2O95864 444 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 HARS2P49590 506 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 AMHR2Q16671 573 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 CES3Q6UWW8 571 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 MFSD7Q6UXD7 560 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 PDGFCQ9NRA1 345 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 AK5Q9Y6K8 562 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 VPS4BO75351 444 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 HSD3B2P26439 372 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 MYBPC1Q00872 1141 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 STILQ15468 1287 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
CHFR-201ENST00000266880 ACTRT2Q8TDY3 377 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 ATL1Q8WXF7 558 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 VPS45Q9NRW7 570 aa11.35□□□□□ -0.59
CHFR-201ENST00000266880 PRAMEF22A3QJZ6 481 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 USP46P62068 366 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CYP4F8P98187 520 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 EMC2Q15006 297 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 INO80DQ53TQ3 878 aaPredicted RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 POF1BQ8WVV4 589 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SLC24A2Q9UI40 661 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CNTFP26441 200 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 POLD2P49005 469 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 DLG1Q12959 904 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CAMK1DQ8IU85 385 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SYNPOQ8N3V7 929 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 ING5Q8WYH8 240 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 REXO5Q96IC2 774 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 RACGAP1Q9H0H5 632 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 DNAJC11Q9NVH1 559 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ENDOD1O94919 500 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 PAGE2Q7Z2X7 111 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CIDEBQ9UHD4 219 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ACOT9Q9Y305 439 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 AAR2Q9Y312 384 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 H3BMM5 538 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ERVK-24P63145 666 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 BNC1Q01954 994 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZCCHC23Q6ZST2 131 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 RAPGEFL1Q9UHV5 662 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SGPL1O95470 568 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 RARGP13631 454 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 UBAP2LQ14157 1087 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 PKN1Q16512 942 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SFRP1Q8N474 314 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 OR52L1Q8NGH7 329 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 LRRC40Q9H9A6 602 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms