RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 LRRC52Q8N7C0 313 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 LRRC39Q96DD0 335 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 ANGPTL3Q9Y5C1 460 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 AK5Q9Y6K8 562 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 SLCO1B7G3V0H7 640 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 B4GALT5O43286 388 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 TIMM44O43615 452 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 ALBP02768 609 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 GNL1P36915 607 aaPredicted RBP11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 MOGSQ13724 837 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 CXCL17Q6UXB2 119 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 BBS12Q6ZW61 710 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 ANKS1BQ7Z6G8 1248 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 SLCO2A1Q92959 643 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 SPATA16Q9BXB7 569 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 PDZD7Q9H5P4 517 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 SSU72Q9NP77 194 aaKnown RBP11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.52
CLSTN3-201ENST00000266546 URB1O60287 2271 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 CAPN8A6NHC0 703 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 M0R3G1 203 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 THP07101 528 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 PSMA4P25789 261 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 TRPC1P48995 793 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 AMHR2Q16671 573 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 LRRC8BQ6P9F7 803 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 ELMSAN1Q6PJG2 1045 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 UNC93AQ86WB7 457 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 PIDD1Q9HB75 910 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 AP4B1Q9Y6B7 739 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 TSPAN1O60635 241 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 USP46P62068 366 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 CDC16Q13042 620 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM172AQ8WUF8 416 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 PDCD6IPQ8WUM4 868 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 KCNN1Q92952 543 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 C16orf70Q9BSU1 422 aa11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 C6orf203Q9P0P8 240 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-201ENST00000266546 KLHL33A6NCF5 533 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 CHADO15335 359 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF189O75820 626 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 GJB1P08034 283 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 COX4I1P13073 169 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 CHRNB2P17787 502 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 RBL1P28749 1068 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 GP5P40197 560 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 MPP2Q14168 576 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ACAP1Q15027 740 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 CST9Q5W186 159 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ADCK1Q86TW2 530 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 BHLHE22Q8NFJ8 381 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ZSCAN18Q8TBC5 510 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 DIS3LQ8TF46 1054 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 DLG3Q92796 817 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ELMO2Q96JJ3 720 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 CEP19Q96LK0 163 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 LRRC40Q9H9A6 602 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 NSMCE4AQ9NXX6 385 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 KLK14Q9P0G3 267 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SCN4AP35499 1836 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 H0Y626 953 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 AP3B1O00203 1094 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 RECQL4O94761 1208 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 TRIM16O95361 564 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SLC4A1P02730 911 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 S100BP04271 92 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 TM4SF4P48230 202 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 NEK2P51955 445 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 TPI1P60174 286 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SNX17Q15036 470 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 CCDC153Q494R4 210 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 PQLC1Q8N2U9 271 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 EIF2AQ9BY44 585 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 RNF208Q9H0X6 261 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 A0A087WXM4 84 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SAC3D1A6NKF1 404 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 PGK1P00558 417 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 OCM2P0CE71 109 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 OCMP0CE72 109 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SULT1E1P49888 294 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 TNIP2Q8NFZ5 429 aa11.76□□□□□ -0.53
CLSTN3-201ENST00000266546 SLC44A1Q8WWI5 657 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms