RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 WRNIP1Q96S55 665 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 SNRNP25Q9BV90 132 aaKnown RBP12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 DRC3Q9H069 523 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 ZBTB26Q9HCK0 441 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 SCN4AP35499 1836 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 CLRN2A0PK11 232 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 G3V2L1 256 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ADCY6O43306 1168 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 CILPO75339 1184 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF189O75820 626 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 IL18RAPO95256 599 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 KRT19P08727 400 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 MGAT1P26572 445 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PSMD8P48556 350 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 TRIM25Q14258 630 aaKnown RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 IRAK1BP1Q5VVH5 260 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ZBTB8OSQ8IWT0 167 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 DCLK2Q8N568 766 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 TNIP2Q8NFZ5 429 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 HTR3CQ8WXA8 447 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 CERS2Q96G23 380 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 HIPK3Q9H422 1215 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM124BQ9H5Z6 455 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 NMRAL1Q9HBL8 299 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 GPATCH2LQ9NWQ4 482 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 OXSMQ9NWU1 459 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 CDH7Q9ULB5 785 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 EDN1P05305 212 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ATICP31939 592 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 LIMK2P53671 638 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 RHDQ02161 417 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PLOD1Q02809 727 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 FRG1Q14331 258 aaKnown RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 MAPRE2Q15555 327 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF829Q3KNS6 432 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM183BPQ6ZVS7 135 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 TNS4Q8IZW8 715 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PBXIP1Q96AQ6 731 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 DUS3LQ96G46 650 aaKnown RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 RANBP9Q96S59 729 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 RBBP8Q99708 897 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 OLAHQ9NV23 265 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 PSAT1Q9Y617 370 aa12.64□□□□□ -0.39
CHMP2B-201ENST00000263780 C7orf72A4D263 438 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 TIMM44O43615 452 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 MSCO60682 206 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 VAPBO95292 243 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 EPHA3P29320 983 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC7A1P30825 629 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 STX5Q13190 355 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NRF1Q16656 503 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 IL23RQ5VWK5 629 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 LIPMQ5VYY2 423 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NXNQ6DKJ4 435 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NAPRTQ6XQN6 538 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF420Q8TAQ5 688 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 SGF29Q96ES7 293 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ADA2Q9NZK5 511 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 TUBGCP4Q9UGJ1 667 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ANKRD6Q9Y2G4 727 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 A0A096LPK6 155 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NEMP1O14524 444 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 DGKIO75912 1065 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 CABYRO75952 493 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ESRRBO95718 433 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 TFEBP19484 476 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 VARSP26640 1264 aaKnown RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ENTPD1P49961 510 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 CDH8P55286 799 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms