RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 CSTF1Q05048 431 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TFDP2Q14188 446 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 PARP15Q460N3 678 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 PITRM1Q5JRX3 1037 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TXNDC11Q6PKC3 985 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TMCO3Q6UWJ1 677 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TFAP2DQ7Z6R9 452 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 DNAAF5Q86Y56 855 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 RCOR2Q8IZ40 523 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 CASKIN2Q8WXE0 1202 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 IGSF8Q969P0 613 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 SNRNP25Q9BV90 132 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 XPO7Q9UIA9 1087 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
CLNS1A-201ENST00000263309 ZNF318Q5VUA4 2279 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 MIF4GDA9UHW6 222 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 K7EQS6 105 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 CBX4O00257 560 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PJA2O43164 708 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 ZNF189O75820 626 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 APBB3O95704 486 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 EPHX1P07099 455 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 RARAP10276 462 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 HOXB2P14652 356 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 MX2P20592 715 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 CNR2P34972 360 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 CLCN6P51797 869 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 NDST2P52849 883 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PTPN5P54829 565 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 GNA12Q03113 381 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 LMAN2Q12907 356 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PLEKHG6Q3KR16 790 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 USP39Q53GS9 565 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 C11orf63Q6NUN7 778 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PEX26Q7Z412 305 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 PAF1Q8N7H5 531 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 TXNDC5Q8NBS9 432 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 BTBD6Q96KE9 485 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 OSGEPQ9NPF4 335 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 RAB23Q9ULC3 237 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 MMP17Q9ULZ9 603 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
CLNS1A-201ENST00000263309 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 MACROD2A1Z1Q3 448 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 MAP3K13O43283 966 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 BUB1O43683 1085 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 PI15O43692 258 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 ZNF217O75362 1048 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 COMTP21964 271 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 CTNNA2P26232 953 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 HLA-FP30511 346 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 CSKP41240 450 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 OGDHQ02218 1023 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 MTAPQ13126 283 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 DPYSL2Q16555 572 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 SMTNL2Q2TAL5 461 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 CWF19L1Q69YN2 538 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 VSIG1Q86XK7 387 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 ALLCQ8N6M5 410 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 RTL3Q8N8U3 475 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 GUCA1BQ9UMX6 200 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 ERVW-1Q9UQF0 538 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 STON1Q9Y6Q2 735 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
CLNS1A-201ENST00000263309 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms