RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TBL1YQ9BQ87 522 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 HGH1Q9BTY7 390 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 MYOZ2Q9NPC6 264 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 KCNK4Q9NYG8 393 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 POLLQ9UGP5 575 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 ATP6AP2A0A1C7CYW4 349 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 E5RJQ4 531 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 ATP6AP2O75787 350 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 POMCP01189 267 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 MAPK1P28482 360 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 NOS3P29474 1203 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 SLC11A2P49281 568 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 SERPINH1P50454 418 aaKnown RBP12.27□□□□□ -0.44
SMG6-201ENST00000263073 ARHGEF6Q15052 776 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 SLC5A9Q2M3M2 681 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 PTPN20Q4JDL3 420 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 ZNF605Q86T29 641 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 HIPK1Q86Z02 1210 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 KLHL31Q9H511 634 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.44
SMG6-201ENST00000263073 IQCMA0A1B0GVH7 501 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 TSPAN19P0C672 248 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 EPHA3P29320 983 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 PRKCQQ04759 706 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 PEX6Q13608 980 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 MTX3Q5HYI7 312 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 C8orf59Q8N0T1 100 aaPredicted RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 GIPC3Q8TF64 312 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 CHID1Q9BWS9 393 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 DDX43Q9NXZ2 648 aaKnown RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 TUBGCP4Q9UGJ1 667 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 ZNF112Q9UJU3 913 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 TDRKHQ9Y2W6 561 aaKnown RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 MYL12BO14950 172 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 CRTAMO95727 393 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 NTRK1P04629 796 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 NAGLUP54802 743 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 BST1Q10588 318 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 MACC1Q6ZN28 852 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 SVOPQ8N4V2 548 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 APOL4Q9BPW4 351 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 DRG1Q9Y295 367 aaKnown RBP12.27□□□□□ -0.45
SMG6-201ENST00000263073 PCDHB7Q9Y5E2 793 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 TCRBV5S4A2TA0A5A2 114 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 FAM220BPB1ANY3 271 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 PPP3CAQ08209 521 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 CDH17Q12864 832 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 IL17AQ16552 155 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 SPANXN3Q5MJ09 141 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 NUAK2Q9H093 628 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 VTI1BQ9UEU0 232 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
SMG6-201ENST00000263073 SNTNA6NMZ2 147 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 BST2Q10589 180 aaKnown RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 TRIM32Q13049 653 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 MYBPC2Q14324 1141 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RSPH1Q8WYR4 309 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 NPAS2Q99743 824 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 MRPS7Q9Y2R9 242 aaKnown RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 DYRK1BQ9Y463 629 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 PSMD12O00232 456 aaPredicted RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 ZC3H11AO75152 810 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMG6-201ENST00000263073 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 RHOCP08134 193 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 SLC2A3P11169 496 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 MUTP22033 750 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 NUP62P37198 522 aaPredicted RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 PNPLA4P41247 253 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 MAGEA10P43363 369 aaPredicted RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 TMEM63BQ5T3F8 832 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ZFP1Q6P2D0 407 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 C16orf59Q7L2K0 433 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ULK2Q8IYT8 1036 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 DEFB106AQ8N104 65 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ST13P5Q8NFI4 369 aaPredicted RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 RCN3Q96D15 328 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 SERAC1Q96JX3 654 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 PNPOQ9NVS9 261 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RPS6KB2Q9UBS0 482 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 TPRKBQ9Y3C4 175 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RAD54BQ9Y620 910 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms