RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 LYNP07948 512 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 CXCR3P49682 368 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 SERPINB9P50453 376 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 BCAT1P54687 386 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 TPI1P60174 286 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 ABCE1P61221 599 aaKnown RBP13.24□□□□□ -0.29
SEC23B-201ENST00000262544 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 C9orf57Q5W0N0 161 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 SNX32Q86XE0 403 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 EXOC8Q8IYI6 725 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 IPMKQ8NFU5 416 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 OR6J1Q8NGC5 347 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 ARNTL2Q8WYA1 636 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 QKIQ96PU8 341 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEC23B-201ENST00000262544 ZNF180Q9UJW8 692 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 NRP1O14786 923 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 MDM4O15151 490 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 MT-CYBP00156 380 aaPredicted RBP13.24□□□□□ -0.29
SEC23B-201ENST00000262544 CYP2C9P11712 490 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 MX2P20592 715 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 USP10Q14694 798 aaKnown RBP13.24□□□□□ -0.29
SEC23B-201ENST00000262544 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
SEC23B-201ENST00000262544 TMEM40Q8WWA1 233 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 ZNF212Q9UDV6 495 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 APPL1Q9UKG1 709 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
SEC23B-201ENST00000262544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 CCL22O00626 93 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 PEX1O43933 1283 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 HOXA11P31270 313 aaPredicted RBP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 NME5P56597 212 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 ANKRD52Q8NB46 1076 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 ANLNQ9NQW6 1124 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 CDH22Q9UJ99 828 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 NEMP2A6NFY4 417 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 PMPCBO75439 489 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 C2P06681 752 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 PGAM1P18669 254 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 NFKB1P19838 968 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 BEX3Q00994 111 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 LAMC2Q13753 1193 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 ZNF484Q5JVG2 852 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 IYDQ6PHW0 289 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 NET1Q7Z628 596 aaPredicted RBP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 LPPQ93052 612 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 CDRT15Q96T59 188 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 SORT1Q99523 831 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 VPS33BQ9H267 617 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.23□□□□□ -0.29
SEC23B-201ENST00000262544 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
SEC23B-201ENST00000262544 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 SNNO75324 88 aaPredicted RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 SLC25A27O95847 323 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 GSRP00390 522 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 JUNP05412 331 aaKnown RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 FGFR3P22607 806 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 NMBRP28336 390 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 WASHC5Q12768 1159 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 CMPK2Q5EBM0 449 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 PAOXQ6QHF9 649 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 DENND6AQ8IWF6 608 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 MCUQ8NE86 351 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 ZFAND2BQ8WV99 257 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 GCOM2Q9BZD3 368 aaPredicted RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 CLIC5Q9NZA1 410 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 TTC3P53804 2025 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 RLFQ13129 1914 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 OR6B1O95007 311 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 HNRNPLP14866 589 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 ZFXP17010 805 aaPredicted RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 GP5P40197 560 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 MATKP42679 507 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 MED21Q13503 144 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 SEMA5AQ13591 1074 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 NOMO2Q5JPE7 1267 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 SLC27A1Q6PCB7 646 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 RNF111Q6ZNA4 994 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 NPWQ8N729 165 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC23B-201ENST00000262544 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
SEC23B-201ENST00000262544 KBTBD7Q8WVZ9 684 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms