RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 ZNF33AQ06730 810 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 TEAD2Q15562 447 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 ANKRD20A2Q5SQ80 823 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 ANKRD20A1Q5TYW2 823 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 ANKRD20A3Q5VUR7 823 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 GRASPQ7Z6J2 395 aaPredicted RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 PPIL6Q8IXY8 311 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 CCDC13Q8IYE1 715 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 CFAP52Q8N1V2 620 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 NAT8LQ8N9F0 302 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 PRICKLE1Q96MT3 831 aaPredicted RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 PWWP2AQ96N64 755 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 DDX50Q9BQ39 737 aaKnown RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
COTL1-201ENST00000262428 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
COTL1-201ENST00000262428 MYO9BQ13459 2157 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 KCNK1O00180 336 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 STK10O94804 968 aaKnown RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 METTL18O95568 372 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 CCNCP24863 283 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 CHKAP35790 457 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 RABGAP1LQ5R372 815 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 ANKRD22Q5VYY1 191 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 ARHGAP36Q6ZRI8 547 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 ZCCHC9Q8N567 271 aaKnown RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 VN1R2Q8NFZ6 395 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 ZSCAN18Q8TBC5 510 aaPredicted RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 PRCCQ92733 491 aaPredicted RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 TASP1Q9H6P5 420 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 RAB6BQ9NRW1 208 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 SEPT10Q9P0V9 454 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
COTL1-201ENST00000262428 ZFP37Q9Y6Q3 630 aaPredicted RBP16.96■□□□□ 0.31
COTL1-201ENST00000262428 TCRBV7S3A2A0A539 114 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 SOBPA7XYQ1 873 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 MTSS1O43312 755 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 MAFKO60675 156 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 PTPN3P26045 913 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 MAPKAPK2P49137 400 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 SGSHP51688 502 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 RPS24P62847 133 aaKnown RBP16.96■□□□□ 0.3
COTL1-201ENST00000262428 ARHGAP15Q53QZ3 475 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 HTR3DQ70Z44 454 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 HOOK3Q86VS8 718 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 LRRC49Q8IUZ0 686 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 ZNF567Q8N184 647 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 C12orf76Q8N812 135 aaPredicted RBP16.96■□□□□ 0.3
COTL1-201ENST00000262428 CDCA3Q99618 268 aaPredicted RBP16.96■□□□□ 0.3
COTL1-201ENST00000262428 CEP41Q9BYV8 373 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 FOXP3Q9BZS1 431 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 ETNK1Q9HBU6 452 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 CFAP97Q9P2B7 532 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 HPCAL4Q9UM19 191 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 ARHGAP26Q9UNA1 814 aa16.96■□□□□ 0.3
COTL1-201ENST00000262428 CHD5Q8TDI0 1954 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 RASA4BC9J798 803 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 GFRA2O00451 464 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
COTL1-201ENST00000262428 RASA4O43374 803 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 TSPAN3O60637 253 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 OPHN1O60890 802 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 CDH4P55283 916 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 BASP1P80723 227 aaKnown RBP16.95■□□□□ 0.3
COTL1-201ENST00000262428 ARHGEF18Q6ZSZ5 1173 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 FAM217AQ8IXS0 508 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 CMTM8Q8IZV2 173 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 ATPAF2Q8N5M1 289 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 TSPYL1Q9H0U9 437 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 SMG9Q9H0W8 520 aaKnown RBP16.95■□□□□ 0.3
COTL1-201ENST00000262428 VIPAS39Q9H9C1 493 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 LSM7Q9UK45 103 aaKnown RBP16.95■□□□□ 0.3
COTL1-201ENST00000262428 ATP8A1Q9Y2Q0 1164 aa16.95■□□□□ 0.3
COTL1-201ENST00000262428 LAMA3Q16787 3333 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 SMAPO00193 183 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 LEFTY2O00292 366 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 ZNF197O14709 1029 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 OR1E1P30953 314 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 HSD17B3P37058 310 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 MAGEA6P43360 314 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 YBEYP58557 167 aaPredicted RBP16.94■□□□□ 0.3
COTL1-201ENST00000262428 KCNJ11Q14654 390 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 SLMAPQ14BN4 828 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 UAP1Q16222 522 aaPredicted RBP16.94■□□□□ 0.3
COTL1-201ENST00000262428 FAXCQ5TGI0 409 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 SMG7Q92540 1137 aaKnown RBP16.94■□□□□ 0.3
COTL1-201ENST00000262428 HMCESQ96FZ2 354 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 PRO3102Q9H379 93 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 PIDD1Q9HB75 910 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 SH3BP1Q9Y3L3 701 aa16.94■□□□□ 0.3
COTL1-201ENST00000262428 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
COTL1-201ENST00000262428 MATN3O15232 486 aa16.93■□□□□ 0.3
COTL1-201ENST00000262428 CHADO15335 359 aa16.93■□□□□ 0.3
COTL1-201ENST00000262428 CLDN11O75508 207 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms