RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SLC13A1Q9BZW2 595 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 RNF208Q9H0X6 261 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 ACTL7BQ9Y614 415 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
VMP1-201ENST00000262291 INPPL1O15357 1258 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 ADAM12O43184 909 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 OPHN1O60890 802 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 NFKB1P19838 968 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 MAGEA3P43357 314 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 KCNJ2P63252 427 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 NR1H3Q13133 447 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 SEPT7Q16181 437 aaKnown RBP13.91□□□□□ -0.18
VMP1-201ENST00000262291 PIGWQ7Z7B1 504 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 DCP1BQ8IZD4 617 aaKnown RBP13.91□□□□□ -0.18
VMP1-201ENST00000262291 PHACTR1Q9C0D0 580 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 ABCC13Q9NSE7 274 aa13.91□□□□□ -0.18
VMP1-201ENST00000262291 ALDH2P05091 517 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 LINGO3P0C6S8 592 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 FDFT1P37268 417 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 GARSP41250 739 aaKnown RBP13.9□□□□□ -0.18
VMP1-201ENST00000262291 ABCG1P45844 678 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 TRIM68Q6AZZ1 485 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.183e-6■■■■□ 19.8
VMP1-201ENST00000262291 CDHR3Q6ZTQ4 885 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 LRRC6Q86X45 466 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 ZNF419Q96HQ0 510 aaPredicted RBP13.9□□□□□ -0.18
VMP1-201ENST00000262291 MAGEB18Q96M61 343 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 ABCF3Q9NUQ8 709 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 MYO16Q9Y6X6 1858 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 CCT8L1PA6NM43 557 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 PRPF4O43172 522 aaKnown RBP eCLIP13.9□□□□□ -0.18
VMP1-201ENST00000262291 ATP9BO43861 1147 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 SNX3O60493 162 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 TUBP50607 506 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 DUSP4Q13115 394 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 BFSP2Q13515 415 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 PARP6Q2NL67 630 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 ATXN7L3BQ96GX2 97 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 FAM111AQ96PZ2 611 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 MLPHQ9BV36 600 aaPredicted RBP13.9□□□□□ -0.18
VMP1-201ENST00000262291 VANGL2Q9ULK5 521 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 NEU3Q9UQ49 428 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 PCDHB5Q9Y5E4 795 aa13.9□□□□□ -0.18
VMP1-201ENST00000262291 LPXNO60711 386 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 CCR1P32246 355 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 ABL2P42684 1182 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 IRX4P78413 519 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 CERCAMQ5T4B2 595 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PDZD4Q76G19 769 aaPredicted RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 SLC26A11Q86WA9 606 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 CIR1Q86X95 450 aaPredicted RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 KIF2BQ8N4N8 673 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 BANPQ8N9N5 519 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 DNAAF3Q8N9W5 541 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 SEPT8Q92599 483 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 CFHR5Q9BXR6 569 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 XAB2Q9HCS7 855 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 RRN3Q9NYV6 651 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 NOP53Q9NZM5 478 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 G3BP2Q9UN86 482 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PSAT1Q9Y617 370 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 IQANK1A0A1B0GTG1 560 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 SDR42E2A6NKP2 422 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 GOLGA8TH3BQL2 631 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 MAP3K13O43283 966 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 VNN2O95498 520 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PYGLP06737 847 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 GALNT2Q10471 571 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PSMD5Q16401 504 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 FBXO32Q969P5 355 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 OXNAD1Q96HP4 312 aaPredicted RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PLCD4Q9BRC7 762 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 PITPNM3Q9BZ71 974 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 SLC39A8Q9C0K1 460 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 NSRP1Q9H0G5 558 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
VMP1-201ENST00000262291 STK38LQ9Y2H1 464 aa13.89□□□□□ -0.19
VMP1-201ENST00000262291 ARHGEF37A1IGU5 675 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 MT-CYBP00156 380 aaPredicted RBP13.88□□□□□ -0.19
VMP1-201ENST00000262291 OVGP1Q12889 678 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 TAF10Q12962 218 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms