RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CAPZA3Q96KX2 299 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 LHX5Q9H2C1 402 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 DDX43Q9NXZ2 648 aaKnown RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 HMGXB4Q9UGU5 601 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 KIAA1257Q9ULG3 409 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 A0A1W2PQF6 199 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 MMP8P22894 467 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PCSK1P29120 753 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 NTSR1P30989 418 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 NDST1P52848 882 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 HLA-BQ31612 363 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 PHTF2Q8N3S3 785 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 NAT16Q8N8M0 369 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 ACBD6Q9BR61 282 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 SLC6A17Q9H1V8 727 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 ADAM22Q9P0K1 906 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 ALG6Q9Y672 507 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
SGCA-201ENST00000262018 MUC22E2RYF6 1773 aaPredicted RBP13.81□□□□□ -0.2
SGCA-201ENST00000262018 KNTC1P50748 2209 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 TNFSF14O43557 240 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CALB1P05937 261 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CD19P15391 556 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 RRM1P23921 792 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CXCR5P32302 372 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 BNC1Q01954 994 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 SUZ12Q15022 739 aaKnown RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 CNGA2Q16280 664 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 TEX35Q5T0J7 233 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 PLEKHA7Q6IQ23 1121 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 IL27RAQ6UWB1 636 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 KIAA1324Q6UXG2 1013 aaKnown RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 DBX2Q6ZNG2 339 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 OSTM1Q86WC4 334 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 MIB1Q86YT6 1006 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 FAM181AQ8N9Y4 354 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 OR6B3Q8NGW1 331 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 IPO4Q8TEX9 1081 aaKnown RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 PSMB7Q99436 277 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 C11orf70Q9BRQ4 267 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 NT5C1AQ9BXI3 368 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
SGCA-201ENST00000262018 PCDHGB2Q9Y5G2 931 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 CPQQ9Y646 472 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
SGCA-201ENST00000262018 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 A8MXQ7 604 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 MIF4GDA9UHW6 222 aaKnown RBP13.79□□□□□ -0.2
SGCA-201ENST00000262018 DDX3YO15523 660 aaKnown RBP13.79□□□□□ -0.2
SGCA-201ENST00000262018 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
SGCA-201ENST00000262018 CXADRP78310 365 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 MESDQ14696 234 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 STILQ15468 1287 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 SGO2Q562F6 1265 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 LY6G5CQ5SRR4 150 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 DNASE2BQ8WZ79 361 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 ACOX2Q99424 681 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 DNAI2Q9GZS0 605 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
SGCA-201ENST00000262018 TRPM5Q9NZQ8 1165 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 DEC1Q9P2X7 70 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 HCN2Q9UL51 889 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 CDH9Q9ULB4 789 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 SCINQ9Y6U3 715 aa13.79□□□□□ -0.2
SGCA-201ENST00000262018 COL6A6A6NMZ7 2263 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 O00370 1275 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 KCNK3O14649 394 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
SGCA-201ENST00000262018 NCAM1P13591 858 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 JUPP14923 745 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 PFKLP17858 780 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 LMO2P25791 158 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 CD6P30203 668 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 SLC7A9P82251 487 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 GAD2Q05329 585 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 ORC1Q13415 861 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
SGCA-201ENST00000262018 PTPRNQ16849 979 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms