RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SATL1Q86VE3 508 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 TREML1Q86YW5 311 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 DEPDC1BQ8WUY9 529 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 CEP41Q9BYV8 373 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 COX16Q9P0S2 106 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 SLC17A6Q9P2U8 582 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 TAGLN3Q9UI15 199 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 CLEC11AQ9Y240 323 aa23.14■■□□□ 1.29
MCF2L-201ENST00000261963 TRIP12Q14669 1992 aaPredicted RBP23.14■■□□□ 1.29
MCF2L-201ENST00000261963 TOP3BO95985 862 aaKnown RBP23.13■■□□□ 1.29
MCF2L-201ENST00000261963 CCDC166P0CW27 439 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 UQCRBP14927 111 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 PTPN1P18031 435 aaKnown RBP23.13■■□□□ 1.29
MCF2L-201ENST00000261963 NOS2P35228 1153 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 SERPINB9P50453 376 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 HSF5Q4G112 596 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-201ENST00000261963 KIAA0319Q5VV43 1072 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 WSCD1Q658N2 575 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 AAGABQ6PD74 315 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 HFE2Q6ZVN8 426 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 NDUFAF2Q8N183 169 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 RNF169Q8NCN4 708 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 EPB41L1Q9H4G0 881 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 PIH1D1Q9NWS0 290 aaKnown RBP23.13■■□□□ 1.29
MCF2L-201ENST00000261963 MYO18AQ92614 2054 aaKnown RBP23.13■■□□□ 1.29
MCF2L-201ENST00000261963 CRHR1P34998 444 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 RGS2P41220 211 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 ITGA9Q13797 1035 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 TEX44Q53QW1 395 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 LRRC8BQ6P9F7 803 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 TIFABQ6ZNK6 161 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 CLEC20AQ6ZU45 233 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 TP53INP2Q8IXH6 220 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 ARNTL2Q8WYA1 636 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 C7orf26Q96N11 449 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 SLC2A13Q96QE2 648 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 CLIC5Q9NZA1 410 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 HSFX1Q9UBD0 423 aa23.13■■□□□ 1.29
MCF2L-201ENST00000261963 LRPAP1P30533 357 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 GLUD2P49448 558 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 CRYBB1P53674 252 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 KDSRQ06136 332 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 MORN1Q5T089 497 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 HACE1Q8IYU2 909 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 KCTD13Q8WZ19 329 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 E2F7Q96AV8 911 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 ZFP42Q96MM3 310 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 DNAI2Q9GZS0 605 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF395Q9H8N7 513 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 EIF2B3Q9NR50 452 aaKnown RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 KCNK4Q9NYG8 393 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PTTG2Q9NZH5 202 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PPARGC1AQ9UBK2 798 aaKnown RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 M0QYT0 321 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 NIPAL4Q0D2K0 466 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 WASHC5Q12768 1159 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 DPYSQ14117 519 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 CHI3L2Q15782 390 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 TMEM259Q4ZIN3 620 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 MDH1BQ5I0G3 518 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 SPRYD7Q5W111 196 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 SLC25A41Q8N5S1 370 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 DGCR14Q96DF8 476 aaKnown RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PPP1R10Q96QC0 940 aaKnown RBP23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PRDM12Q9H4Q4 367 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PRDM16Q9HAZ2 1276 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 S100A14Q9HCY8 104 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 PIGVQ9NUD9 493 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 CACNG4Q9UBN1 327 aa23.12■■□□□ 1.29
MCF2L-201ENST00000261963 CCDC195A0A1B0GUA6 201 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 SDR42E2A6NKP2 422 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 GABRDO14764 452 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 CAPN15O75808 1086 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 RABGGTBP53611 331 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 TMPRSS15P98073 1019 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 BEX3Q00994 111 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 KYAT3Q6YP21 454 aaKnown RBP23.11■■□□□ 1.29
MCF2L-201ENST00000261963 DHDDSQ86SQ9 333 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 TRIM42Q8IWZ5 723 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 PIP4K2CQ8TBX8 421 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 RHBDL2Q9NX52 303 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 SF3B1O75533 1304 aaKnown RBP eCLIP23.11■■□□□ 1.29
MCF2L-201ENST00000261963 DOCK3Q8IZD9 2030 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 IQCA1LA6NCM1 817 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 I3L4J1 428 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 NRP1O14786 923 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 FYNP06241 537 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 MYL3P08590 195 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 MGAT1P26572 445 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 PSMB4P28070 264 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 SESN2P58004 480 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-201ENST00000261963 NME3Q13232 169 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 CASC4Q6P4E1 433 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 NUDCD3Q8IVD9 361 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 LRRC4Q9HBW1 653 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 CPA4Q9UI42 421 aa23.11■■□□□ 1.29
MCF2L-201ENST00000261963 OR6B1O95007 311 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 BPGMP07738 259 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 MAP2K5Q13163 448 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 PAFAH1B3Q15102 231 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms