RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 XIAPP98170 497 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 RELAQ04206 551 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 HNRNPDQ14103 355 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ARCQ7LC44 396 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ZNF354CQ86Y25 554 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ADCY4Q8NFM4 1077 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PLEKHA8Q96JA3 519 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 AGAP2Q99490 1192 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 SNX15Q9NRS6 342 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 CNTN3Q9P232 1028 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 RUVBL2Q9Y230 463 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 MED7O43513 233 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ERBB2P04626 1255 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 MAPTP10636 758 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 EPHX2P34913 555 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 NKX2-5P52952 324 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ZNF460Q14592 562 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 TEX44Q53QW1 395 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 OGFRL1Q5TC84 451 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 RNF149Q8NC42 400 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 DQX1Q8TE96 717 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 KLHL32Q96NJ5 620 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 CHST12Q9NRB3 414 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 GMPR2Q9P2T1 348 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 EFR3BQ9Y2G0 817 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 H3BNX3 289 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 NRP1O14786 923 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ARL4AP40617 200 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 GRIA4P48058 902 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 RAD23AP54725 363 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 PCLAFQ15004 111 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CA9Q16790 459 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 SIX5Q8N196 739 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CDH19Q9H159 772 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ZFYVE28Q9HCC9 887 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 A0A087WXM4 84 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 LINC00854A0A1B0GVQ3 168 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 INPP4BO15327 924 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CRCPO75575 148 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 TGM2P21980 687 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 PPARGP37231 505 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 STX1BP61266 288 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM219BQ5XKK7 198 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM163AQ96GL9 167 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 RTKNQ9BST9 563 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 GATA5Q9BWX5 397 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 FNDC3AQ9Y2H6 1198 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 C4BPAP04003 597 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ALDOAP04075 364 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CYP2F1P24903 491 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 KRT76Q01546 638 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 TCEAL1Q15170 157 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 STILQ15468 1287 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ZFP1Q6P2D0 407 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CCDC81Q6ZN84 652 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CAND1Q86VP6 1230 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CROCCP3Q8IVE0 287 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 CRYGNQ8WXF5 182 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 ISOC1Q96CN7 298 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 HEPHQ9BQS7 1158 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 C1orf21Q9H246 121 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 NMRAL1Q9HBL8 299 aa16.24■□□□□ 0.19
PRPF40B-201ENST00000261897 SH3PXD2BA1X283 911 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 DGAT1O75907 488 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 NCAM1P13591 858 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 RXRBP28702 533 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 ADORA2BP29275 332 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 JAK3P52333 1124 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 TAP1Q03518 808 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 DNASE1L3Q13609 305 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 ADRM1Q16186 407 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 MGAT5BQ3V5L5 792 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CCDC80Q76M96 950 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 MAVSQ7Z434 540 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 PLD5Q8N7P1 536 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 OR52K1Q8NGK4 314 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 FBXL20Q96IG2 436 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 PIWIL1Q96J94 861 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 POLE4Q9NR33 117 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 PNPLA3Q9NST1 481 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 DDX28Q9NUL7 540 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 FAIMQ9NVQ4 179 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SPATA7Q9P0W8 599 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms