RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 FAM25GB3EWG6 89 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 KCNK1O00180 336 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 IFNA14P01570 189 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 CBX3Q13185 183 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 FBXO39Q8N4B4 442 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 MECRQ9BV79 373 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 SSU72Q9NP77 194 aaKnown RBP11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 TBC1D13Q9NVG8 400 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 C3orf18Q9UK00 162 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 IDH3BO43837 385 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 SYNCRIPO60506 623 aaKnown RBP11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 FBXO21O94952 628 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 ARIH2O95376 493 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 SOAT1P35610 550 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 PPP3CCP48454 512 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 BNIP2Q12982 314 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 CDH24Q86UP0 819 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 CHSY1Q86X52 802 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 CERS2Q96G23 380 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 COX4I2Q96KJ9 171 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 CHID1Q9BWS9 393 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 WDR12Q9GZL7 423 aaKnown RBP11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 RIBC2Q9H4K1 309 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 HPS4Q9NQG7 708 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 PCDHA11Q9Y5I1 949 aa11.02□□□□□ -0.64
CSNK1A1-201ENST00000261798 TISP43B9A030 160 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 UPP2O95045 317 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 KRT6BP04259 564 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ANXA6P08133 673 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 CYP3A4P08684 503 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 HOXB8P17481 243 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 KRT6CP48668 564 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 MAD2L1Q13257 205 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 SYTL3Q4VX76 610 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 NOTUMQ6P988 496 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 APTXQ7Z2E3 356 aaKnown RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 VAT1Q99536 393 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ACE2Q9BYF1 805 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 CLEC4MQ9H2X3 399 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 KCNQ5Q9NR82 932 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 SFMBT1Q9UHJ3 866 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 GNEQ9Y223 722 aaKnown RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ROBO3Q96MS0 1386 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PLA2G6O60733 806 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 LBPP18428 481 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ITPK1Q13572 414 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 TAB1Q15750 504 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ARMC3Q5W041 872 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PTAR1Q7Z6K3 402 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 TRIM74Q86UV6 250 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 TRIM73Q86UV7 250 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 UBASH3BQ8TF42 649 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 FAM136AQ96C01 138 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 CLPTM1LQ96KA5 538 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 SPATA13Q96N96 652 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PDCD2LQ9BRP1 358 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PRDM16Q9HAZ2 1276 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 FANCEQ9HB96 536 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ABCB10Q9NRK6 738 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ENOPH1Q9UHY7 261 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 AP3M1Q9Y2T2 418 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PLLPQ9Y342 182 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 PLK1P53350 603 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 NIPA1Q7RTP0 329 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 CHST13Q8NET6 341 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
CSNK1A1-201ENST00000261798 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 TRAFD1O14545 582 aaPredicted RBP11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 LGR5O75473 907 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 RECQL5O94762 991 aaPredicted RBP11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 HMBSP08397 361 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 NAA20P61599 178 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 ANKS3Q6ZW76 656 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 HPS6Q86YV9 775 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 DUSP12Q9UNI6 340 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 DHRS12A0PJE2 317 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 NBNO60934 754 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 SLC2A4P14672 509 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 ATP5F1P24539 256 aaPredicted RBP11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 EPHA3P29320 983 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 GRIA4P48058 902 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 RTP1P59025 263 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 AMHR2Q16671 573 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 SPATA16Q9BXB7 569 aa11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 RBM22Q9NW64 420 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSNK1A1-201ENST00000261798 DKK3Q9UBP4 350 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms