RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CCNB1IP1Q9NPC3 277 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SAGE1Q9NXZ1 904 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SPG21Q9NZD8 308 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 GOLGA4Q13439 2230 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 FGFR4P22455 802 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MATKP42679 507 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 FBXW4P57775 412 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 OTUD4Q01804 1114 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ANXA8L1Q5VT79 327 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 METTL21CQ5VZV1 264 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MFSD5Q6N075 450 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MIER2Q8N344 545 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MBOAT7Q96N66 472 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MRPL46Q9H2W6 279 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ELOVL6Q9H5J4 265 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ADPRHL2Q9NX46 363 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TRPS1Q9UHF7 1281 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MRPS17Q9Y2R5 130 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 KCPQ6ZWJ8 1503 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PLCH1Q4KWH8 1693 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SLC28A1O00337 649 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MDM4O15151 490 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZBTB14O43829 449 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PIGRP01833 764 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 COPZ1P61923 177 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MRPL28Q13084 256 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZACNQ401N2 412 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NTPCRQ9BSD7 190 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZYG11BQ9C0D3 744 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 DDX43Q9NXZ2 648 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ARHGAP28Q9P2N2 729 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TRPM3Q9HCF6 1732 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SLC4A1P02730 911 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SUOXP51687 545 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 RAD23BP54727 409 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 IL2P60568 153 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SNAP25P60880 206 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SP3Q02447 781 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TAB1Q15750 504 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CDC73Q6P1J9 531 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PRPF39Q86UA1 669 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ADHFE1Q8IWW8 467 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NUP93Q8N1F7 819 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 C12orf50Q8NA57 414 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM161BQ8NDZ6 487 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NR4A3Q92570 626 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 WNK4Q96J92 1243 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZMAT2Q96NC0 199 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PAFAH2Q99487 392 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SYBUQ9NX95 663 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 COPG2Q9UBF2 871 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ASMTLO95671 621 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CHRM3P20309 590 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 GRK4P32298 578 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PTPN9P43378 593 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NDST2P52849 883 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NOMO2Q5JPE7 1267 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ERICH5Q6P6B1 374 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 EID3Q8N140 333 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJC9Q8WXX5 260 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 BTN2A3PQ96KV6 586 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM175Q9BSA9 504 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 GMIPQ9P107 970 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 F8W810 466 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PER2O15055 1255 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ENTPD5O75356 428 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 WFS1O76024 890 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 USP1O94782 785 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ARP10275 920 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PMS1P54277 932 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 BCL2L1Q07817 233 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SLC29A2Q14542 456 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CBWD2Q8IUF1 395 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CENPLQ8N0S6 344 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 NIPA2Q8N8Q9 360 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 OVCA2Q8WZ82 227 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 EBNA1BP2Q99848 306 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CATSPERZQ9NTU4 200 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 L1RE1Q9UN81 338 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 DTNAQ9Y4J8 743 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 C5P01031 1676 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 WDR91A4D1P6 747 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZMYND10O75800 440 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 KCNMB4Q86W47 210 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CLEC4FQ8N1N0 589 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 CPA6Q8N4T0 437 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 ZSWIM2Q8NEG5 633 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 MTMR8Q96EF0 704 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 EEF2KMTQ96G04 330 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 FANCEQ9HB96 536 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 C3orf14Q9HBI5 128 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 SIK3Q9Y2K2 1263 aa4.39□□□□□ -1.71
VPS13C-202ENST00000261517 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 KLRG2A4D1S0 409 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-202ENST00000261517 AREL1O15033 823 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms