RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CHFRQ96EP1 664 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 PRDM16Q9HAZ2 1276 aa16.23■□□□□ 0.19
CCDC90B-201ENST00000260054 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 PGRMC1O00264 195 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 PDE2AO00408 941 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 CACNG3O60359 315 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 TGM2P21980 687 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 C6orf118Q5T5N4 469 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 AFMIDQ63HM1 303 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 ASTLQ6HA08 431 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 ARHGAP12Q8IWW6 846 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 CCDC33Q8N5R6 958 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 FIBINQ8TAL6 211 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 LRRC19Q9H756 370 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 DTLQ9NZJ0 730 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 R3HDM2Q9Y2K5 976 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 HEY1Q9Y5J3 304 aa16.22■□□□□ 0.19
CCDC90B-201ENST00000260054 A0A0D9SEW6 157 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 APOC4-APOC2K7ER74 178 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 TRIM24O15164 1050 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 APOC2P02655 101 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 RHOCP08134 193 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 HLA-FP30511 346 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 GJA4P35212 333 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 SERPINB6P35237 376 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 NUMBP49757 651 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 TERF1P54274 439 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 NR1H3Q13133 447 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 TDGQ13569 410 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 CCDC181Q5TID7 509 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 LZTR1Q8N653 840 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 LMLNQ96KR4 655 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 SLC39A8Q9C0K1 460 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 TRPV5Q9NQA5 729 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 DONSONQ9NYP3 566 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 CDC23Q9UJX2 597 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 FBXO10Q9UK96 956 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
CCDC90B-201ENST00000260054 RAMP2O60895 175 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 TULP3O75386 442 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 MZF1P28698 734 aaPredicted RBP16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 CD70P32970 193 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC6A11P48066 632 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 SOX9P48436 509 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 NDST2P52849 883 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 GNA12Q03113 381 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 LMAN2Q12907 356 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 ACTL9Q8TC94 416 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 P3H4Q92791 437 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 XPO6Q96QU8 1125 aaKnown RBP16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 ABCB8Q9NUT2 735 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 MRFAP1Q9Y605 127 aa16.21■□□□□ 0.18
CCDC90B-201ENST00000260054 NUP205Q92621 2012 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 COL4A2P08572 1712 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 TCF20Q9UGU0 1960 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 RASA4BC9J798 803 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 RASA4O43374 803 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 CISD3P0C7P0 127 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 SRFP11831 508 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 ACVRL1P37023 503 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 OPRD1P41143 372 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 CSKP41240 450 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 OTUD4Q01804 1114 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 MESP2Q0VG99 397 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 POLD3Q15054 466 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 NOMO1Q15155 1222 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 IER5LQ5T953 404 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 RNF219Q5W0B1 726 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 CCDC117Q8IWD4 279 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 OR7D4Q8NG98 312 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 ATG4AQ8WYN0 398 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 DNASE1L2Q92874 299 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 ARHGEF2Q92974 986 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 ALG14Q96F25 216 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 OLFM3Q96PB7 478 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 NAP1L3Q99457 506 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 AP1M1Q9BXS5 423 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC2A11Q9BYW1 496 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 RNF14Q9UBS8 474 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 OR51B4Q9Y5P0 310 aa16.2■□□□□ 0.18
CCDC90B-201ENST00000260054 DFFAO00273 331 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 NR2C2P49116 596 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 DGKGP49619 791 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 PAPOLAP51003 745 aaKnown RBP16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 YBEYP58557 167 aaPredicted RBP16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 PARP15Q460N3 678 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 ZNF783Q6ZMS7 281 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 ARHGAP36Q6ZRI8 547 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 APCDD1Q8J025 514 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 LRRN4Q8WUT4 740 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 MAIP1Q8WWC4 291 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 C1orf54Q8WWF1 131 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms