RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 MED10Q9BTT4 135 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 NXF3Q9H4D5 531 aaKnown RBP13.53□□□□□ -0.24
PGBD1-201ENST00000259883 LIN28AQ9H9Z2 209 aaKnown RBP13.53□□□□□ -0.24
PGBD1-201ENST00000259883 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 PRKCGP05129 697 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 C2P06681 752 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 TSHRP16473 764 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 OAZ1P54368 228 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 ART3Q13508 389 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 KCTD2Q14681 263 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 ARCQ7LC44 396 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 KCTD4Q8WVF5 259 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 NR1H4Q96RI1 486 aaPredicted RBP13.53□□□□□ -0.24
PGBD1-201ENST00000259883 GATA5Q9BWX5 397 aaPredicted RBP13.53□□□□□ -0.24
PGBD1-201ENST00000259883 PRMT7Q9NVM4 692 aaPredicted RBP13.53□□□□□ -0.24
PGBD1-201ENST00000259883 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
PGBD1-201ENST00000259883 BIRC5O15392 142 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 HNRNPLP14866 589 aaKnown RBP eCLIP13.52□□□□□ -0.24
PGBD1-201ENST00000259883 RALGDSQ12967 914 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 CTBP1Q13363 440 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 CHST13Q8NET6 341 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 EXT2Q93063 718 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 OSMRQ99650 979 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 IL1RL2Q9HB29 575 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 DCDC2Q9UHG0 476 aa13.52□□□□□ -0.24
PGBD1-201ENST00000259883 GCATO75600 419 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 BEST1O76090 585 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 SRGAP2BP0DMP2 458 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 PIK3R1P27986 724 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.25
PGBD1-201ENST00000259883 POU6F1Q14863 301 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 ACAD11Q709F0 780 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 CATSPER4Q7RTX7 472 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 RNF139Q8WU17 664 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 QKIQ96PU8 341 aaKnown RBP eCLIP13.52□□□□□ -0.25
PGBD1-201ENST00000259883 SIK2Q9H0K1 926 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 VANGL2Q9ULK5 521 aa13.52□□□□□ -0.25
PGBD1-201ENST00000259883 PDE4DIPQ5VU43 2346 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 TPST1O60507 370 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 PGAM1P18669 254 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GP5P40197 560 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 MS4A2Q01362 244 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GSTA3Q16772 222 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 CMPK2Q5EBM0 449 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ARL13AQ5H913 290 aaPredicted RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 MCUQ8NE86 351 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 NAT14Q8WUY8 206 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SLC35F5Q8WV83 523 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 HIC2Q96JB3 615 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ATP6AP2A0A1C7CYW4 349 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 EEF2KO00418 725 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 DNAJA2O60884 412 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ATP6AP2O75787 350 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 C22orf31O95567 290 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GARSP41250 739 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GRIA4P48058 902 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 CXCR3P49682 368 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 CHN2P52757 468 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 PRAMEP78395 509 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 COG7P83436 770 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GRM1Q13255 1194 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 AMIGO2Q86SJ2 522 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SLC41A1Q8IVJ1 513 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 DSELQ8IZU8 1212 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 DIS3LQ8TF46 1054 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SNRNP27Q8WVK2 155 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 EZH1Q92800 747 aaPredicted RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 CYP3A43Q9HB55 503 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 NMRAL1Q9HBL8 299 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 SETD4Q9NVD3 440 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GMPR2Q9P2T1 348 aaKnown RBP13.51□□□□□ -0.25
PGBD1-201ENST00000259883 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
PGBD1-201ENST00000259883 ZBTB24O43167 697 aaPredicted RBP13.5□□□□□ -0.25
PGBD1-201ENST00000259883 CLPTM1O96005 669 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 SEPT6Q14141 434 aa13.5□□□□□ -0.25
PGBD1-201ENST00000259883 OTOP3Q7RTS5 596 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms