RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RBL2Q08999 1139 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 CALCOCO2Q13137 446 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 NCOA4Q13772 614 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 CAPRIN1Q14444 709 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 PPP2R5DQ14738 602 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 TMEM132BQ14DG7 1078 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 CDK10Q15131 360 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 KLHDC7AQ5VTJ3 777 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 SLC9A4Q6AI14 798 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 RETSATQ6NUM9 610 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 ZYG11AQ6WRX3 759 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 METTL23Q86XA0 190 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 SLC37A3Q8NCC5 494 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 ZBTB44Q8NCP5 570 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 GSTCDQ8NEC7 633 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 OR4D10Q8NGI6 311 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 OR2W6PQ8NHA6 318 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 HEXDCQ8WVB3 486 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 GTF3AQ92664 365 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 VPS39Q96JC1 886 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 TMEM120AQ9BXJ8 343 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 DDX47Q9H0S4 455 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 SUV39H2Q9H5I1 410 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 NOL6Q9H6R4 1146 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 DDX28Q9NUL7 540 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 NOC2LQ9Y3T9 749 aaKnown RBP7.9□□□□□ -1.14
GPNMB-201ENST00000258733 CEMIPQ8WUJ3 1361 aa7.9□□□□□ -1.14
GPNMB-201ENST00000258733 J3QRK9 145 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 TRAFD1O14545 582 aaPredicted RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 CHMP2AO43633 222 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 ASNA1O43681 348 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 GAS2O43903 313 aaKnown RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 GAS7O60861 476 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 DHFRP00374 187 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 ANXA6P08133 673 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 THEGLP0DJG4 465 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 PDIA3P30101 505 aaKnown RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 GSK3AP49840 483 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 RIDAP52758 137 aaKnown RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 CASP6P55212 293 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 SPARCL1Q14515 664 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 TTI2Q6NXR4 508 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF572Q7Z3I7 529 aaPredicted RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 PDSS2Q86YH6 399 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 KLHL7Q8IXQ5 586 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 CNTROBQ8N137 903 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 SPPL3Q8TCT6 385 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 FBXL8Q96CD0 374 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 PRMT1Q99873 361 aaKnown RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 IDI2Q9BXS1 227 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF700Q9H0M5 742 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 RMND5AQ9H871 391 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 GDF3Q9NR23 364 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 THG1LQ9NWX6 298 aaKnown RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 GUCA1BQ9UMX6 200 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 COL3A1P02461 1466 aaPredicted RBP7.9□□□□□ -1.15
GPNMB-201ENST00000258733 KIAA0232Q92628 1395 aa7.9□□□□□ -1.15
GPNMB-201ENST00000258733 NT5C1B-RDH14C9J2C7 533 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 DDX3XO00571 662 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MAN1A2O60476 641 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ULK1O75385 1050 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 DNTTP04053 509 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PRKCBP05771 671 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CYP21A2P08686 494 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ENO3P13929 434 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PDCP20941 246 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 OXTRP30559 389 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 HSD17B3P37058 310 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CAPZA1P52907 286 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ITGA8P53708 1063 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CDR2Q01850 454 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MYL5Q02045 173 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 DLG1Q12959 904 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GRM7Q14831 915 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PCBP1Q15365 356 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PRMT9Q6P2P2 845 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 VGLL2Q8N8G2 317 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SPATA4Q8NEY3 305 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF507Q8TCN5 953 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SMG7Q92540 1137 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SYMPKQ92797 1274 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MSANTD3Q96H12 275 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TXNDC15Q96J42 360 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SLA2Q9H6Q3 261 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SRP68Q9UHB9 627 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 KCNH3Q9ULD8 1083 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MAP3K2Q9Y2U5 619 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NR2E1Q9Y466 385 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 DTNAQ9Y4J8 743 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TULP4Q9NRJ4 1543 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 A0A1W2PRG6 482 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FAM25AB3EWG3 89 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FAM25CB3EWG5 89 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FAM25GB3EWG6 89 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms