RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OR9Q1Q8NGQ5 310 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 TEPSINQ96N21 525 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 FAIM2Q9BWQ8 316 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 VTI1BQ9UEU0 232 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 ADGRA3Q8IWK6 1321 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SUOXP51687 545 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 DGKKQ5KSL6 1271 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 KHDRBS2Q5VWX1 349 aaKnown RBP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 ARHGAP17Q68EM7 881 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 KATNAL2Q8IYT4 538 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 NTPCRQ9BSD7 190 aaKnown RBP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 MCOLN1Q9GZU1 580 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 FGF18O76093 207 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 TNNI3P19429 210 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 HSD17B2P37059 387 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 CD151P48509 253 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 NDST2P52849 883 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 OTOAQ7RTW8 1153 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 GPR135Q8IZ08 494 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 AHI1Q8N157 1196 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC32A1Q9H598 525 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 GLI3P10071 1580 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 APOC4-APOC2K7ER74 178 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 LATS1O95835 1130 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 APOC2P02655 101 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ANXA6P08133 673 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 FLT3P36888 993 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 KCNA1Q09470 495 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 RAP1GAP2Q684P5 730 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 RBM43Q6ZSC3 357 aaKnown RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 UHMK1Q8TAS1 419 aaKnown RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 BHMTQ93088 406 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF514Q96K75 400 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 C8orf48Q96LL4 319 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 CNTN3Q9P232 1028 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PMM2O15305 246 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 SGTAO43765 313 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 CCNE2O96020 404 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ADH1BP00325 375 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 IDSP22304 550 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PRKCIP41743 596 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 BPIFB1Q8TDL5 484 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 NXPE3Q969Y0 559 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 IL22Q9GZX6 179 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 COG5Q9UP83 839 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 DNAJC8O75937 253 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 MLYCDO95822 493 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 SYPP08247 313 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ELFN1P0C7U0 828 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ESRRAP11474 423 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 ARRB1P49407 418 aaPredicted RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 LONRF1Q17RB8 773 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PAGE2Q7Z2X7 111 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 NRBF2Q96F24 287 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 FGFR1P11362 822 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 MLNP12872 115 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 TAF10Q12962 218 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 PRRG3Q9BZD7 231 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 CDYLQ9Y232 598 aa13.68□□□□□ -0.22
PRPF38A-201ENST00000257181 OCM2P0CE71 109 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 OCMP0CE72 109 aaPredicted RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 RNF135Q8IUD6 432 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF599Q96NL3 588 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 HEPHQ9BQS7 1158 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 NRP1O14786 923 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 OAS2P29728 719 aaKnown RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 CARSP49589 748 aaKnown RBP13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 PCID2Q5JVF3 399 aa13.67□□□□□ -0.22
PRPF38A-201ENST00000257181 ATAD3BQ5T9A4 648 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms