RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 COX16Q9P0S2 106 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 SERGEFQ9UGK8 458 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 DNAJC12Q9UKB3 198 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 TPX2Q9ULW0 747 aaKnown RBP21.72■■□□□ 1.07
NEDD8-201ENST00000250495 GRAP2O75791 330 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 PDGFRAP16234 1089 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 GOT1P17174 413 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 CTSKP43235 329 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 CCT8P50990 548 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 C21orf59P57076 290 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 SLC6A3Q01959 620 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 MAN2A1Q16706 1144 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 FBXL22Q6P050 247 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 FAM114A1Q8IWE2 563 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 STK40Q8N2I9 435 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 RPRD1AQ96P16 312 aaPredicted RBP21.71■■□□□ 1.07
NEDD8-201ENST00000250495 SYNCQ9H7C4 482 aa21.71■■□□□ 1.07
NEDD8-201ENST00000250495 FOXN3O00409 490 aaPredicted RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 KCNK3O14649 394 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 VILLO15195 856 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 PCDHGA12O60330 932 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 IL1BP01584 269 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 MZF1P28698 734 aaPredicted RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 NOS2P35228 1153 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 GRK6P43250 576 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 PSMD8P48556 350 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 STK19P49842 368 aaPredicted RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 VASPP50552 380 aaPredicted RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 CCR5P51681 352 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 BPIFB4P59827 614 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 ELAVL3Q14576 367 aaKnown RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 FAM183BPQ6ZVS7 135 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 ZDHHC17Q8IUH5 632 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 C1orf131Q8NDD1 294 aaKnown RBP21.7■■□□□ 1.06
NEDD8-201ENST00000250495 SIX2Q9NPC8 291 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 RRN3Q9NYV6 651 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 CHD6Q8TD26 2715 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 AKAP13Q12802 2813 aa21.7■■□□□ 1.06
NEDD8-201ENST00000250495 TMEM131Q92545 1883 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 H0Y8X5 98 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 CLCN1P35523 988 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 NME3Q13232 169 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 ZNF177Q13360 481 aaPredicted RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 AUHQ13825 339 aaKnown RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 OLFML1Q6UWY5 402 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 LAYNQ6UX15 382 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 CCNI2Q6ZMN8 369 aaPredicted RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 SLC26A9Q7LBE3 791 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 SLC47A2Q86VL8 602 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 CIR1Q86X95 450 aaPredicted RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 ZNF397Q8NF99 534 aaPredicted RBP21.69■■□□□ 1.06
NEDD8-201ENST00000250495 OR14C36Q8NHC7 312 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 SPAG5Q96R06 1193 aa21.69■■□□□ 1.06
NEDD8-201ENST00000250495 M0QYT0 321 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 DAB1O75553 588 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 ERBB2P04626 1255 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 PRKCSHP14314 528 aaPredicted RBP21.68■■□□□ 1.06
NEDD8-201ENST00000250495 INAVAQ3KP66 663 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 ACCSLQ4AC99 568 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 KCNT1Q5JUK3 1230 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 CXorf57Q6NSI4 855 aaKnown RBP21.68■■□□□ 1.06
NEDD8-201ENST00000250495 DSG4Q86SJ6 1040 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 FAM71AQ8IYT1 594 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 AADATQ8N5Z0 425 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 SLC6A18Q96N87 628 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 FEM1AQ9BSK4 669 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 PDCL3Q9H2J4 239 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 NDST4Q9H3R1 872 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 EBF2Q9HAK2 575 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 TMEM51Q9NW97 253 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 SLC25A13Q9UJS0 675 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 VANGL2Q9ULK5 521 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 BTBD3Q9Y2F9 522 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 HS3ST4Q9Y661 456 aa21.68■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3DA0A087WVF3 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3IA0A087WXS9 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3EA0A087X179 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3KA0A087X1G2 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3FA6NER0 549 aaPredicted RBP21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3LB9A6J9 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TNFSF14O43557 240 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 CLDN11O75508 207 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 ATXN1LP0C7T5 689 aaKnown RBP21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3HP0C7X1 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 CD38P28907 300 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 SCAPQ12770 1279 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 PTPN20Q4JDL3 420 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 VWA3BQ502W6 1294 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 FAM46CQ5VWP2 391 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3GQ6DHY5 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3CQ6IPX1 549 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D3Q8IZP1 549 aaPredicted RBP21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TMEM35BQ8NCS4 154 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 FRS2Q8WU20 508 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 OR8D1Q8WZ84 308 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 AASDHPPTQ9NRN7 309 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 TOR4AQ9NXH8 423 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 AJAP1Q9UKB5 411 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms