RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
RFPL3-201ENST00000249007 KLHL11Q9NVR0 708 aa12.42□□□□□ -0.42
RFPL3-201ENST00000249007 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
RFPL3-201ENST00000249007 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
RFPL3-201ENST00000249007 CA5BQ9Y2D0 317 aa12.42□□□□□ -0.42
RFPL3-201ENST00000249007 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
RFPL3-201ENST00000249007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 PRAMEF26H0Y7S4 382 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 CTIFO43310 598 aaKnown RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 TRIM21P19474 475 aaKnown RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 SRSF6Q13247 344 aaKnown RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 ZNF177Q13360 481 aaPredicted RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 BIRC3Q13489 604 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 ARID5BQ14865 1188 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 TGIF1Q15583 401 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 SKIDA1Q1XH10 827 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 POM121L1PQ3SYA9 428 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 C14orf80Q86SX3 495 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 PTRH1Q86Y79 214 aaKnown RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 ZNF564Q8TBZ8 553 aaPredicted RBP12.41□□□□□ -0.42
RFPL3-201ENST00000249007 WFDC5Q8TCV5 224 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 DUSP23Q9BVJ7 150 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 USP3Q9Y6I4 520 aa12.41□□□□□ -0.42
RFPL3-201ENST00000249007 CCDC187A0A096LP49 1063 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 CPED1A4D0V7 1026 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 K7ESM1 405 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 STX6O43752 255 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 NOBOXO60393 691 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 TCEA3O75764 348 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 IL1BP01584 269 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
RFPL3-201ENST00000249007 CDKN3Q16667 212 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 SETMARQ53H47 684 aaPredicted RBP12.4□□□□□ -0.42
RFPL3-201ENST00000249007 ADGRF1Q5T601 910 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.4□□□□□ -0.42
RFPL3-201ENST00000249007 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 SV2BQ7L1I2 683 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 UNC93AQ86WB7 457 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 FAM129BQ96TA1 746 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 CSMD1Q96PZ7 3565 aa12.4□□□□□ -0.42
RFPL3-201ENST00000249007 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.42
RFPL3-201ENST00000249007 EDDM13A0A1B0GTR0 161 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 FRMD3A2A2Y4 597 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 TARSL2A2RTX5 802 aaKnown RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 TTC34A8MYJ7 566 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 SCAMP1O15126 338 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 RTN2O75298 545 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 NEBLO76041 1014 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 ASLP04424 464 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 SLFN14P0C7P3 912 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 P4HA1P13674 534 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 SLC5A2P31639 672 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 DRD3P35462 400 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 CSKP41240 450 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 SGSHP51688 502 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 NCOA4Q13772 614 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 CLCA4Q14CN2 919 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 GUSBP11Q6P575 273 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 CRTC1Q6UUV9 634 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 EFL1Q7Z2Z2 1120 aaKnown RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 TRIM69Q86WT6 500 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 STK40Q8N2I9 435 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 ZNF557Q8N988 423 aaPredicted RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 KDM1BQ8NB78 822 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 LIN37Q96GY3 246 aaPredicted RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 EPSTI1Q96J88 318 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 MRGPRX3Q96LB0 322 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 PANK4Q9NVE7 773 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 NCKIPSDQ9NZQ3 722 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 PLEKHB1Q9UF11 243 aaPredicted RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 STOML2Q9UJZ1 356 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 PCDHGA7Q9Y5G6 932 aa12.4□□□□□ -0.43
RFPL3-201ENST00000249007 MORC2Q9Y6X9 1032 aaPredicted RBP12.4□□□□□ -0.43
RFPL3-201ENST00000249007 MZF1P28698 734 aaPredicted RBP12.39□□□□□ -0.43
RFPL3-201ENST00000249007 CASRP41180 1078 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 CYP2J2P51589 502 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 KMT5BQ4FZB7 885 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 MPP7Q5T2T1 576 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 ZCCHC8Q6NZY4 707 aaKnown RBP12.39□□□□□ -0.43
RFPL3-201ENST00000249007 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 MFN1Q8IWA4 741 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 MYOCQ99972 504 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 AGPAT3Q9NRZ7 376 aa12.39□□□□□ -0.43
RFPL3-201ENST00000249007 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 PLD2O14939 933 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 SLC7A4O43246 635 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 PLRG1O43660 514 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms