RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MYBPHLA2RUH7 354 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 PTGESO14684 152 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 PPP1R12AO14974 1030 aaPredicted RBP26.15■■□□□ 1.78
RAB40C-201ENST00000248139 NCAM1P13591 858 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 ANPEPP15144 967 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 GP5P40197 560 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CCR10P46092 362 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CCNHP51946 323 aaPredicted RBP26.15■■□□□ 1.78
RAB40C-201ENST00000248139 TWF2Q6IBS0 349 aaKnown RBP26.15■■□□□ 1.78
RAB40C-201ENST00000248139 PYDC1Q8WXC3 89 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 NT5C3BQ969T7 300 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 PPP1R12CQ9BZL4 782 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 VANGL2Q9ULK5 521 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 DOCK3Q8IZD9 2030 aa26.15■■□□□ 1.78
RAB40C-201ENST00000248139 CIB2O75838 187 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 CD68P34810 354 aaPredicted RBP26.14■■□□□ 1.78
RAB40C-201ENST00000248139 SCNN1AP37088 669 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 LDLRAD1Q5T700 205 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 ZNF781Q8N8C0 355 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 USP33Q8TEY7 942 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 MS4A4AQ96JQ5 239 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 NRCAMQ92823 1304 aa26.14■■□□□ 1.78
RAB40C-201ENST00000248139 KIF1CO43896 1103 aaKnown RBP26.14■■□□□ 1.77
RAB40C-201ENST00000248139 TOMM70O94826 608 aa26.14■■□□□ 1.77
RAB40C-201ENST00000248139 CPA3P15088 417 aa26.14■■□□□ 1.77
RAB40C-201ENST00000248139 ACMSDQ8TDX5 336 aa26.14■■□□□ 1.77
RAB40C-201ENST00000248139 DDX50Q9BQ39 737 aaKnown RBP26.14■■□□□ 1.77
RAB40C-201ENST00000248139 DDIT4Q9NX09 232 aa26.14■■□□□ 1.77
RAB40C-201ENST00000248139 DDX43Q9NXZ2 648 aaKnown RBP26.14■■□□□ 1.77
RAB40C-201ENST00000248139 STAP1Q9ULZ2 295 aa26.14■■□□□ 1.77
RAB40C-201ENST00000248139 G3BP2Q9UN86 482 aaKnown RBP26.14■■□□□ 1.77
RAB40C-201ENST00000248139 TPI1P60174 286 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 ABCE1P61221 599 aaKnown RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 PAFAH1B3Q15102 231 aaKnown RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 PPP4R1Q8TF05 950 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 UNKQ9C0B0 810 aaKnown RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 WDR6Q9NNW5 1121 aaKnown RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 EIF2B3Q9NR50 452 aaKnown RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 E9PBE3 544 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 KLHL41O60662 606 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 LTFP02788 710 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 HOXD8P13378 290 aaPredicted RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 ACTR3P61158 418 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 NET1Q7Z628 596 aaPredicted RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 MLPHQ9BV36 600 aaPredicted RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 RCOR3Q9P2K3 495 aaPredicted RBP26.13■■□□□ 1.77
RAB40C-201ENST00000248139 SOX13Q9UN79 622 aa26.13■■□□□ 1.77
RAB40C-201ENST00000248139 ZNF195O14628 629 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 MAP3K7O43318 606 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 DCXO43602 365 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 STRNO43815 780 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 AOC1P19801 751 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 MFSD10Q14728 455 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 PSTKQ8IV42 348 aaKnown RBP26.12■■□□□ 1.77
RAB40C-201ENST00000248139 MAPK15Q8TD08 544 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 SMOQ99835 787 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 RALGAPA2Q2PPJ7 1873 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 GOLGA8QA0A0J9YX86 632 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 ZCWPW2A0A1B0GU75 182 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 SMIM35A0A1B0GVV1 85 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 GOLGA8OA6NCC3 632 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 ENO4A6NNW6 628 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.12■■□□□ 1.77
RAB40C-201ENST00000248139 GOLGA8NF8WBI6 632 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 AP1G2O75843 785 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 OLFML2BQ68BL8 750 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 PDPK2PQ6A1A2 396 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.12■■□□□ 1.77
RAB40C-201ENST00000248139 PPFIBP2Q8ND30 876 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 PHC3Q8NDX5 983 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 IGSF9Q9P2J2 1179 aa26.12■■□□□ 1.77
RAB40C-201ENST00000248139 A0A096LPK6 155 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 F2P00734 622 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 KCNE1P15382 129 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 NFKB1P19838 968 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 DNAL1Q4LDG9 190 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 LPPQ93052 612 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 RBBP8Q99708 897 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 IARS2Q9NSE4 1012 aaKnown RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 UBTFL6P0CB48 400 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 FAM200BP0CF97 657 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 PNPLA4P41247 253 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 ITGA7Q13683 1181 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 ANKRD20A4Q4UJ75 823 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 SLC9B1Q4ZJI4 515 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 PAN2Q504Q3 1202 aaKnown RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 BNIPLQ7Z465 357 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 LIMS2Q7Z4I7 341 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 MYLK4Q86YV6 388 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 ZMIZ2Q8NF64 920 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 PCED1BQ96HM7 432 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 FERMT1Q9BQL6 677 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 PAAF1Q9BRP4 392 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 C20orf96Q9NUD7 363 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 ZNF212Q9UDV6 495 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 LRCH1Q9Y2L9 728 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 LIN7AO14910 233 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 MYL3P08590 195 aa26.11■■□□□ 1.77
RAB40C-201ENST00000248139 WARSP23381 471 aaKnown RBP26.11■■□□□ 1.77
RAB40C-201ENST00000248139 GRB14Q14449 540 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms