RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 RAB33AQ14088 237 aa23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 PPP2R5DQ14738 602 aa23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 CELF6Q96J87 481 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 C17orf80Q9BSJ5 609 aa23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 CCSER2Q9H7U1 834 aa23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 XAB2Q9HCS7 855 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 EIF2B3Q9NR50 452 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-201ENST00000248121 CEP290O15078 2479 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 SPAG7O75391 227 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 CNPP09543 421 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 CTSAP10619 480 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 HOXC13P31276 330 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 ERVFC1P60507 584 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 MSANTD2Q6P1R3 559 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 UNC5AQ6ZN44 842 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 ZSCAN18Q8TBC5 510 aaPredicted RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 FCRL2Q96LA5 508 aaPredicted RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 EBNA1BP2Q99848 306 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 LINC01553A4QN01 128 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 HMGA1P17096 107 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 CTNNB1P35222 781 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 MSH2P43246 934 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 CDK16Q00536 496 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 RWDD4Q6NW29 188 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 PID1Q7Z2X4 250 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 C4orf33Q8N1A6 199 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 SLC44A1Q8WWI5 657 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 FERMT1Q9BQL6 677 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 HTATIP2Q9BUP3 242 aa23.93■■□□□ 1.42
SYNGR3-201ENST00000248121 EBAG9O00559 213 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 MX2P20592 715 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 SERPINB6P35237 376 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 EFEMP1Q12805 493 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 ZBTB17Q13105 803 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 SLC39A13Q96H72 371 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 SERPINB11Q96P15 392 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 TTLL2Q9BWV7 592 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 BRD8Q9H0E9 1235 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 SMYD2Q9NRG4 433 aa23.92■■□□□ 1.42
SYNGR3-201ENST00000248121 CXorf49A8MYA2 514 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 CPP00450 1065 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 ZDHHC11BP0C7U3 371 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 CD68P34810 354 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 TUFMP49411 452 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 WDR4P57081 412 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 TPGS2Q68CL5 300 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 LRRC8BQ6P9F7 803 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 ARHGAP12Q8IWW6 846 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 LRRC34Q8IZ02 419 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 DENND1AQ8TEH3 1009 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 LBHD1Q9BQE6 289 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 PIH1D1Q9NWS0 290 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 SENP1Q9P0U3 644 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 KLHL8Q9P2G9 620 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 HS3ST4Q9Y661 456 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 DOCK6Q96HP0 2047 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 FAM47DPA6NHR8 397 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 PRPF4O43172 522 aaKnown RBP eCLIP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 MLNP12872 115 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 PRKCHP24723 683 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 STX2P32856 288 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 TWF1Q12792 350 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 C14orf80Q86SX3 495 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 MIB1Q86YT6 1006 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 TLR8Q9NR97 1041 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 TLR6Q9Y2C9 796 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 MAD1L1Q9Y6D9 718 aa23.91■■□□□ 1.42
SYNGR3-201ENST00000248121 HIDE1A8MVS5 230 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 ZBTB24O43167 697 aaPredicted RBP23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 TYROBPO43914 113 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 MOCS2O96007 188 aaPredicted RBP23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 APOEP02649 317 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 OLIG2Q13516 323 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 TMC7Q7Z402 723 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 GDAP1Q8TB36 358 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 PHOSPHO2Q8TCD6 241 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 CKAP2Q8WWK9 683 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 RXFP1Q9HBX9 757 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 NDFIP2Q9NV92 336 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 PRRG1O14668 218 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 BMPR1AP36894 532 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 PLD1Q13393 1074 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 SPARCL1Q14515 664 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 PIK3R6Q5UE93 754 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 TRMT10BQ6PF06 316 aaKnown RBP23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 ARHGAP36Q6ZRI8 547 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 ARNTL2Q8WYA1 636 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 SMC6Q96SB8 1091 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 TCF25Q9BQ70 676 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 ZMYND15Q9H091 742 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 FNIP2Q9P278 1114 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 INSL5Q9Y5Q6 135 aa23.9■■□□□ 1.42
SYNGR3-201ENST00000248121 ATG2AQ2TAZ0 1938 aa23.89■■□□□ 1.42
SYNGR3-201ENST00000248121 TRDMT1O14717 391 aaKnown RBP23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 TGM5O43548 720 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 CRADDP78560 199 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 SARNPP82979 210 aaKnown RBP23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 PLPP4Q5VZY2 271 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms