RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 ZNF781Q8N8C0 355 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SCAMP5Q8TAC9 235 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 MAPK15Q8TD08 544 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 MTBPQ96DY7 904 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SGF29Q96ES7 293 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 ZNF333Q96JL9 665 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 TMEM209Q96SK2 561 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SORT1Q99523 831 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 APBA2Q99767 749 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 FRMD8Q9BZ67 464 aaPredicted RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 TKTL2Q9H0I9 626 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 STOML1Q9UBI4 398 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 APOBEC2Q9Y235 224 aaKnown RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 MYADML2A6NDP7 307 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 DFFAO00273 331 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 POMCP01189 267 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 POLBP06746 335 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 FAM200BP0CF97 657 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 ZCCHC18P0CG32 403 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 ARSAP15289 507 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 PGAM1P18669 254 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 BDNFP23560 247 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 FDFT1P37268 417 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 ACADSBP45954 432 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 IDH3AP50213 366 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SERPINB9P50453 376 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SLC34A1Q06495 639 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 SPDYAQ5MJ70 313 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 RAPH1Q70E73 1250 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 OMDQ99983 421 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 MLPHQ9BV36 600 aaPredicted RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
SYDE2-201ENST00000234668 MORF4L1Q9UBU8 362 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 FIS1Q9Y3D6 152 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 NRCAMQ92823 1304 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 COL1A2P08123 1366 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 A0A0G2JMZ2 1700 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 LRRC37A2A6NM11 1700 aa9.36□□□□□ -0.91
SYDE2-201ENST00000234668 A0A096LPK6 155 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 STRNO43815 780 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 OPHN1O60890 802 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SIN3BO75182 1162 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 CPA3P15088 417 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 ATP6V1C1P21283 382 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 VHLP40337 213 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 BRCC3P46736 316 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 PSEN2P49810 448 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SCNN1GP51170 649 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 CTBP1Q13363 440 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 TUBB3Q13509 450 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 BLMHQ13867 455 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 POU6F1Q14863 301 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SV2CQ496J9 727 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SLC9B1Q4ZJI4 515 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 IQSEC1Q6DN90 963 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 TRIM42Q8IWZ5 723 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 RNF148Q8N7C7 305 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 PPP4R1Q8TF05 950 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 EMID1Q96A84 441 aaPredicted RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 GDAP2Q9NXN4 497 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 COPG2Q9UBF2 871 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 OR12D3Q9UGF7 316 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 TK2O00142 265 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 DCLK1O15075 740 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 ALDH1A2O94788 518 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 MOCS2O96007 188 aaPredicted RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 F2P00734 622 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 LINGO3P0C6S8 592 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SERPINB5P36952 375 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 CCNG1P51959 295 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 DPYSQ14117 519 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 ANKRD20A4Q4UJ75 823 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 RPS27LQ71UM5 84 aaKnown RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 MARK2Q7KZI7 788 aaKnown RBP9.35□□□□□ -0.91
SYDE2-201ENST00000234668 HPS6Q86YV9 775 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 PHC3Q8NDX5 983 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SLC26A7Q8TE54 656 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 OR52B2Q96RD2 323 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 TUBB6Q9BUF5 446 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 FTHL17Q9BXU8 183 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 WDCPQ9H6R7 721 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 NDFIP2Q9NV92 336 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 DERAQ9Y315 318 aa9.35□□□□□ -0.91
SYDE2-201ENST00000234668 PPP1R12AO14974 1030 aaPredicted RBP9.34□□□□□ -0.91
SYDE2-201ENST00000234668 MSI1O43347 362 aaKnown RBP9.34□□□□□ -0.91
SYDE2-201ENST00000234668 GLRA3O75311 464 aa9.34□□□□□ -0.91
SYDE2-201ENST00000234668 LRIG2O94898 1065 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms