RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ETNK2Q9NVF9 386 aa11.74□□□□□ -0.53
NOD1-201ENST00000222823 A0A0A0MRY4 1105 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 KLRG2A4D1S0 409 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 ALDH1A2O94788 518 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 WDR47O94967 919 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 CYP1A1P04798 512 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 MLNP12872 115 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 ETS1P14921 441 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PSMC3P17980 439 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 ITGB6P18564 788 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PBLDP30039 288 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 CCDC81Q6ZN84 652 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 POU5F2Q8N7G0 328 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PHF21AQ96BD5 680 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 HIC2Q96JB3 615 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 SNRNP25Q9BV90 132 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 ABCC13Q9NSE7 274 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 TBC1D23Q9NUY8 699 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 DMAC2Q9NW81 257 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 DDX3YO15523 660 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 CCNG1P51959 295 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PLK1P53350 603 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 NCALDP61601 193 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 KYAT3Q6YP21 454 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 BBS12Q6ZW61 710 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PHF13Q86YI8 300 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 TMCO5AQ8N6Q1 288 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 CASP10Q92851 521 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 RNF157Q96PX1 679 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 LRRC19Q9H756 370 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 PRDM16Q9HAZ2 1276 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 HMX1Q9NP08 348 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 CACNA2D2Q9NY47 1150 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 VTI1BQ9UEU0 232 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 SEPT3Q9UH03 358 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 DPP7Q9UHL4 492 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 C2CD2Q9Y426 696 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 KIF1CO43896 1103 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 RPL22P35268 128 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 ZC3H3Q8IXZ2 948 aaKnown RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 USP6NLQ92738 828 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 OXNAD1Q96HP4 312 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 PDGFDQ9GZP0 370 aaPredicted RBP11.73□□□□□ -0.53
NOD1-201ENST00000222823 DYRK1BQ9Y463 629 aa11.73□□□□□ -0.53
NOD1-201ENST00000222823 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ARHGEF9O43307 516 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 LIASO43766 372 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 CCNT2O60583 730 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 GUCA1CO95843 209 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 HOXB8P17481 243 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 CYP2C18P33260 490 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ANXA11P50995 505 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 BLVRAP53004 296 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 TRIM60Q495X7 471 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ANKRD52Q8NB46 1076 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 METTL6Q8TCB7 284 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 FAM120BQ96EK7 910 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 C6orf203Q9P0P8 240 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 PHGDHO43175 533 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 DCXO43602 365 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 SLC2A4P14672 509 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 UGCGQ16739 394 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PSTKQ8IV42 348 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 CENPLQ8N0S6 344 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 MIER2Q8N344 545 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 POLR1EQ9GZS1 481 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 E7ENQ6 273 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 CHADO15335 359 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 CPSF4O95639 269 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 ERVK-10P10266 1014 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 GRK3P35626 688 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 MMP13P45452 471 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PWP1Q13610 501 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 AUHQ13825 339 aaKnown RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 STARD3Q14849 445 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 IYDQ6PHW0 289 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 FAM183BPQ6ZVS7 135 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 BTBD10Q9BSF8 475 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 DPY30Q9C005 99 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 OSGEPL1Q9H4B0 414 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 MID1IP1Q9NPA3 183 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 NDUFA13Q9P0J0 144 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 AHDC1Q5TGY3 1603 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 A0A0B4J269 797 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms