RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 TMEM216Q9P0N5 145 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 LRCH1Q9Y2L9 728 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 SNX10Q9Y5X0 201 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 ZNF189O75820 626 aaPredicted RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 ODC1P11926 461 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 TCN1P20061 433 aaPredicted RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 PDE1CQ14123 709 aaPredicted RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 TAZQ16635 292 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 CRYBG2Q8N1P7 616 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 HDAC11Q96DB2 347 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 TCF7L2Q9NQB0 619 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 PACSIN3Q9UKS6 424 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 AP3B1O00203 1094 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 ZBTB24O43167 697 aaPredicted RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 ATP6V1C1P21283 382 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 SPDYAQ5MJ70 313 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 HFE2Q6ZVN8 426 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 SMARCD1Q96GM5 515 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 FGD4Q96M96 766 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 ARHGEF38Q9NXL2 777 aa15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 RCOR3Q9P2K3 495 aaPredicted RBP15.28■□□□□ 0.04
UBE2D4-201ENST00000222402 YJEFN3A6XGL0 299 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 HUNKP57058 714 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 NAB1Q13506 487 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 SPATA24Q86W54 205 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 HNRNPABQ99729 332 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 CCDC68Q9H2F9 335 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 SP110Q9HB58 689 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 ABI2Q9NYB9 513 aaPredicted RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 SPTLC1O15269 473 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 PSMD3O43242 534 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 ANXA9O76027 345 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 HMBSP08397 361 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 HOXA11P31270 313 aaPredicted RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 DSG1Q02413 1049 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 TAF12Q16514 161 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 KCNN1Q92952 543 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 CATSPERBQ9H7T0 1116 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 PIGVQ9NUD9 493 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 EPS15L1Q9UBC2 864 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 TRHDEQ9UKU6 1024 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 ACOT9Q9Y305 439 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 AAR2Q9Y312 384 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 PSAT1Q9Y617 370 aa15.27■□□□□ 0.04
UBE2D4-201ENST00000222402 GIPC1O14908 333 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 TKTP29401 623 aaKnown RBP15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 THPOP40225 353 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 NAGLUP54802 743 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 TBL3Q12788 808 aaKnown RBP15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 PPWD1Q96BP3 646 aaKnown RBP15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 TRIM4Q9C037 500 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 Q9H521 79 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 CYP4F12Q9HCS2 524 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 CHRAC1Q9NRG0 131 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 RBM22Q9NW64 420 aaKnown RBP eCLIP15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 NSMCE4AQ9NXX6 385 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 COPG2Q9UBF2 871 aa15.27■□□□□ 0.03
UBE2D4-201ENST00000222402 MYBPHLA2RUH7 354 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ITM2AO43736 263 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ENDOD1O94919 500 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ETV4P43268 484 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 STX1BP61266 288 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 DLG2Q15700 870 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 FSCN1Q16658 493 aaKnown RBP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 MARK2Q7KZI7 788 aaKnown RBP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 WDR60Q8WVS4 1066 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 MIPEPQ99797 713 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 NUF2Q9BZD4 464 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 CDYLQ9Y232 598 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 C2P06681 752 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 STMN1P16949 149 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 PMLP29590 882 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 CRYBB1P53674 252 aaPredicted RBP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ANKRD20A4Q4UJ75 823 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 TRIM67Q6ZTA4 783 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ST13P4Q8IZP2 240 aaPredicted RBP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 AGAP2Q99490 1192 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 TRIM62Q9BVG3 475 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 ZNF212Q9UDV6 495 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 RGS17Q9UGC6 210 aaPredicted RBP15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 MAGEB16A2A368 324 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 MPOP05164 745 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 NPY2RP49146 381 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 MED21Q13503 144 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
UBE2D4-201ENST00000222402 OSTM1Q86WC4 334 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms