RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 DNAAF3Q8N9W5 541 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 NAT14Q8WUY8 206 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 KCNK16Q96T55 309 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 CCDC28BQ9BUN5 200 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 OCEL1Q9H607 264 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 KLHL8Q9P2G9 620 aaPredicted RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 ATP9BO43861 1147 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 NME3Q13232 169 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 DYNC1I2Q13409 638 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 LAMB3Q13751 1172 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 UGT2A3Q6UWM9 527 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 TMC7Q7Z402 723 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 SLC2A14Q8TDB8 520 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 USP13Q92995 863 aaPredicted RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 MFSD3Q96ES6 412 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 DCUN1D1Q96GG9 259 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 MARK4Q96L34 752 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 MPHOSPH6Q99547 160 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 NDNQ99608 321 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 RTKNQ9BST9 563 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 EIF2B3Q9NR50 452 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 A0A0G2JMZ2 1700 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 LRRC37A2A6NM11 1700 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 WDR90Q96KV7 1748 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 CNMDO75829 334 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 LGALS2P05162 132 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 SPRP35270 261 aaPredicted RBP18.91■□□□□ 0.62
CACTIN-201ENST00000221899 PKNOX1P55347 436 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 NAB1Q13506 487 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 GRM2Q14416 872 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 AFG1LQ8WV93 481 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 NCSTNQ92542 709 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 GATA5Q9BWX5 397 aaPredicted RBP18.91■□□□□ 0.62
CACTIN-201ENST00000221899 VCX3AQ9NNX9 186 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 PABPC4LP0CB38 370 aaKnown RBP18.91■□□□□ 0.62
CACTIN-201ENST00000221899 PIK3R1P27986 724 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 BCAT1P54687 386 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 ITGA7Q13683 1181 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 SPANXN3Q5MJ09 141 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 MAP3K21Q5TCX8 1036 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.91■□□□□ 0.62
CACTIN-201ENST00000221899 EPAS1Q99814 870 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 NAT9Q9BTE0 207 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 GJD2Q9UKL4 321 aa18.91■□□□□ 0.62
CACTIN-201ENST00000221899 LIMK2P53671 638 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 KCTD2Q14681 263 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 CERCAMQ5T4B2 595 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 TMEM198Q66K66 360 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 SDCCAG8Q86SQ7 713 aaPredicted RBP18.9■□□□□ 0.62
CACTIN-201ENST00000221899 PQLC1Q8N2U9 271 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 ANKRD52Q8NB46 1076 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 PPP1R13LQ8WUF5 828 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 CDRT15Q96T59 188 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 UBE2OQ9C0C9 1292 aaKnown RBP18.9■□□□□ 0.62
CACTIN-201ENST00000221899 TK2O00142 265 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 CASQ2O14958 399 aaPredicted RBP18.9■□□□□ 0.62
CACTIN-201ENST00000221899 TRIM13O60858 407 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 C2P06681 752 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 TPH1P17752 444 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 PMLP29590 882 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 GLRBP48167 497 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 THOP1P52888 689 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 XIAPP98170 497 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 ADIGQ0VDE8 80 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 ZNF484Q5JVG2 852 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 OGFRL1Q5TC84 451 aaPredicted RBP18.9■□□□□ 0.62
CACTIN-201ENST00000221899 SPATA24Q86W54 205 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 URGCPQ8TCY9 931 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 NUF2Q9BZD4 464 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 NMRAL1Q9HBL8 299 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 GTF2IRD1Q9UHL9 959 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 VANGL2Q9ULK5 521 aa18.9■□□□□ 0.62
CACTIN-201ENST00000221899 TNS1Q9HBL0 1735 aaKnown RBP18.9■□□□□ 0.62
CACTIN-201ENST00000221899 MYOCOSA0A1B0GUC4 107 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 IRF6O14896 467 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 XRCC1P18887 633 aaPredicted RBP18.89■□□□□ 0.62
CACTIN-201ENST00000221899 MATKP42679 507 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 GLUD2P49448 558 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 GK3PQ14409 553 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 PDK1Q15118 436 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 OTUD5Q96G74 571 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 EIF2AQ9BY44 585 aaKnown RBP18.89■□□□□ 0.62
CACTIN-201ENST00000221899 UBAP1Q9NZ09 502 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 SLC39A10Q9ULF5 831 aa18.89■□□□□ 0.62
CACTIN-201ENST00000221899 STX16-NPEPL1H3BU86 382 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 FBXO21O94952 628 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 GLDCP23378 1020 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 SNAPC2Q13487 334 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 TTLL4Q14679 1199 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 KIZQ2M2Z5 673 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 LSM12Q3MHD2 195 aaKnown RBP18.89■□□□□ 0.61
CACTIN-201ENST00000221899 ARHGAP17Q68EM7 881 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 NXNQ6DKJ4 435 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 DSELQ8IZU8 1212 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 RCN3Q96D15 328 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 HAPLN3Q96S86 360 aa18.89■□□□□ 0.61
CACTIN-201ENST00000221899 FERMT1Q9BQL6 677 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms