RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZSCAN18Q8TBC5 510 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 EPS8L3Q8TE67 593 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 IGSF8Q969P0 613 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 KLHL5Q96PQ7 755 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MTIF3Q9H2K0 278 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF334Q9HCZ1 680 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ENTPD7Q9NQZ7 604 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LINC01553A4QN01 128 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 HIDE1A8MVS5 230 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 F5H423 210 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 EBAG9O00559 213 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MTSS1O43312 755 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 AVILO75366 819 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CNTN5O94779 1100 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ABHD2P08910 425 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TPSB2P20231 275 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DNAJB1P25685 340 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF33AQ06730 810 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZBTB17Q13105 803 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TPSAB1Q15661 275 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 BBS9Q3SYG4 887 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ALFQ53S48 1182 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ACBD5Q5T8D3 534 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 AFMIDQ63HM1 303 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TFAP2DQ7Z6R9 452 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CAND1Q86VP6 1230 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PGM2Q96G03 612 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LBHD1Q9BQE6 289 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 C17orf80Q9BSJ5 609 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 HTATIP2Q9BUP3 242 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SLC39A8Q9C0K1 460 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 E7EVH7 732 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RHOQP17081 205 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PSMB4P28070 264 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 FDFT1P37268 417 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MTA1Q13330 715 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PID1Q7Z2X4 250 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ITIH5Q86UX2 942 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ATPAF2Q8N5M1 289 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PYROXD1Q8WU10 500 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TSGA13Q96PP4 275 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 FRMD8Q9BZ67 464 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 IL21Q9HBE4 155 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TMEM248Q9NWD8 314 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 KLHL8Q9P2G9 620 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 IGSF9Q9P2J2 1179 aa20.16■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CLUHO75153 1309 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SMIM23A6NLE4 172 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SRRM3A6NNA2 597 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 F11P03951 625 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 COG7P83436 770 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CBLBQ13191 982 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LONRF1Q17RB8 773 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF534Q76KX8 674 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CHSY1Q86X52 802 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 AGGF1Q8N302 714 aaeCLIP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MCUQ8NE86 351 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 FBXO36Q8NEA4 188 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 POF1BQ8WVV4 589 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MYEOVQ96EZ4 313 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NOL6Q9H6R4 1146 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF212Q9UDV6 495 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 GOLGA6L7A0A1B0GV03 622 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TLDC2A0PJX2 215 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 C2orf71A6NGG8 1288 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RASGRF2O14827 1237 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MAFKO60675 156 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ARHGEF15O94989 841 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CCNCP24863 283 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SLCO1A2P46721 670 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PARP6Q2NL67 630 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TEX44Q53QW1 395 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 FAM133BQ5BKY9 247 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PLPP4Q5VZY2 271 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 UMODL1-AS1Q8N2C9 162 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RPRD1AQ96P16 312 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CCT8L2Q96SF2 557 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ROPN1BQ9BZX4 212 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ROPN1Q9HAT0 212 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PPANQ9NQ55 473 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 GKN1Q9NS71 199 aa20.15■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DRGXA6NNA5 263 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 STC2O76061 302 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C8AP07357 584 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MYOGP15173 224 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MAGEA3P43357 314 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 HARS2P49590 506 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CAPN12Q6ZSI9 719 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PDCD7Q8N8D1 485 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MRPL43Q8N983 215 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZNF473Q8WTR7 871 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PLD4Q96BZ4 506 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 AGAP3Q96P47 875 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 VAT1Q99536 393 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TLR9Q9NR96 1032 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ASB3Q9Y575 518 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TEX264Q9Y6I9 313 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZBTB24O43167 697 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms