RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Ophn1Q99J31 802 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 LipfQ9CPP7 395 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Anks3Q9CZK6 655 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Phospho2Q9D9M5 241 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Caln1Q9JJG7 219 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Cetn2Q9R1K9 172 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Slc23a1Q9Z2J0 605 aa14.2□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm13090A2A899 111 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Nxpe3B9EKK6 559 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm4450E9Q007 373 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm597E9Q8J5 896 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm2888K7N746 267 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Bub1O08901 1058 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gdap1O88741 358 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Zp3P10761 424 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Npr1P18293 1057 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 MsnP26041 577 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Pola2P33611 600 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Itga4Q00651 1039 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 IqcmQ149I8 489 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Slc38a5Q3U1J0 479 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Cog7Q3UM29 770 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Tcf4Q60722 670 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 PterQ60866 349 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Tnfaip2Q61333 691 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 EsrrbQ61539 433 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Hsd3b4Q61767 373 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Krt32Q62168 407 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Itga3Q62470 1053 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Ssxb10Q6XAR7 170 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Kiaa0895Q7TQE7 519 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Olfr855Q7TRF8 312 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Ctdp1Q7TSG2 960 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Kcnf1Q7TSH7 493 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Hmgxb4Q80Y32 594 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Hpcal4Q8BGZ1 191 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Nup93Q8BJ71 819 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Slc7a4Q8BLQ7 635 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Taf5Q8C092 801 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Sept10Q8C650 452 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Zc3h3Q8CHP0 950 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Caap1Q8VDY9 356 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Atpaf2Q91YY4 289 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gprc5bQ923Z0 410 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 March2Q99M02 246 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gadd45gip1Q9CR59 222 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Dph5Q9CWQ0 281 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Cxxc1Q9CWW7 660 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Vps28Q9D1C8 221 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Dnaaf1Q9D2H9 634 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Rasgef1cQ9D300 466 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Xab2Q9DCD2 855 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Capn12Q9ER56 720 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Ddx24Q9ESV0 857 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 D7h11orf16Q9JJR6 402 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 C1qtnf1Q9QXP7 281 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Plod1Q9R0E2 728 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 HephQ9Z0Z4 1157 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Nfs1Q9Z1J3 459 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Mtmr7Q9Z2C9 660 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 MylkQ6PDN3 1941 aaKnown RBP14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Unc80Q8BLN6 3261 aa14.19□□□□□ -0.14
Ercc1-203ENSMUST00000160369 PtprfA2A8L5 1898 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Zfp985A2A7A5 519 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Fam43bA2AM80 330 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Usp51B1AY15 661 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm3182K7N6T8 263 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 DldO08749 509 aaKnown RBP14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Ap3d1O54774 1199 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 ComtO88587 265 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 XlrP05531 208 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Hoxa9P09631 271 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gna12P27600 379 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Nap1l1P28656 391 aaKnown RBP14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 CskP41241 450 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Ndst2P52850 883 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Pafah1b1P63005 410 aaKnown RBP14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Mtf2Q02395 593 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Cdk7Q03147 346 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Lsmem1Q3UQS2 128 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 CcnhQ61458 323 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Il10raQ61727 575 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Znf185Q62394 352 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Hs3st2Q673U1 367 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Tra2aQ6PFR5 281 aaKnown RBP14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Wfikkn2Q7TQN3 571 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Lrsam1Q80ZI6 727 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Fra10ac1Q8BP78 315 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Prr33Q8C494 260 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Fam221bQ8C627 487 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Vmn1r18Q8R2C8 299 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Dnajc14Q921R4 703 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Cmtm8Q9CZR4 173 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Fam114a1Q9D281 569 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Zranb2Q9R020 330 aaKnown RBP14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Col27a1Q5QNQ9 1845 aa14.18□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Zfp811A0A0J9YU71 552 aa14.17□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm13285B1AYI3 182 aa14.17□□□□□ -0.14
Ercc1-203ENSMUST00000160369 Gm13275B1AYI8 182 aa14.17□□□□□ -0.14
Ercc1-203ENSMUST00000160369 DgkiD3YWQ0 1071 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms