RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mgat5Q8R4G6 740 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Zdhhc12Q8VC90 267 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 NcaldQ91X97 193 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PigxQ99LV7 254 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pfdn1Q9CWM4 122 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ccdc77Q9CZH8 489 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pkp3Q9QY23 797 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tnfsf13bQ9WU72 309 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm28961A0A087WPA5 222 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm21858A0A087WQ24 222 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nrp1P97333 923 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tcf4Q60722 670 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Eps15l1Q60902 907 aaKnown RBP15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dna2Q6ZQJ5 1062 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q8CCC3 530 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 TgdsQ8VDR7 355 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Satl1Q9D5N8 744 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 NvlQ9DBY8 855 aaKnown RBP15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ccdc88cQ6VGS5 2009 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm8922F6XVS9 199 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cyp2b9P12790 491 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pramel7Q810Y8 479 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sept8Q8CHH9 429 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nsl1Q8K305 281 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Caskin2Q8VHK1 1201 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pdk3Q922H2 415 aaKnown RBP15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pde2aQ922S4 916 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Smad9Q9JIW5 430 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Myh3P13541 1940 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mc4rP56450 332 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Adamts10P58459 1104 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Trpm4Q7TN37 1213 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fbxo38Q8BMI0 1194 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sugp1Q8CH02 643 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 CmasQ99KK2 432 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 HemgnQ9ERZ0 503 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ly6iQ9WU67 134 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tmem115Q9WUH1 350 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cylc2B1AWN8 422 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Adam15O88839 864 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 C2P21180 760 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q32P12 615 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lars2Q8VDC0 902 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 4930550L24RikQ99PA7 320 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q9CPS8 106 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tnfaip8l2Q9D8Y7 184 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 F830016B08RikG3UWE2 416 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 B020004C17RikJ3QP07 232 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fam91a1Q3UVG3 837 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rbmx2Q8R0F5 326 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lsm7Q9CQQ8 103 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ptk2bQ9QVP9 1009 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Znhit2Q9QY66 399 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rnf19bA2A7Q9 732 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm6133B2RY53 190 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Clk2O35491 499 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 RasefQ5RI75 627 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 GpamQ61586 827 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Utp14bQ6EJB6 756 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rbm12b1Q80YR9 836 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Slc9a4Q8BUE1 797 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Spdye4bQ8CDE8 236 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Acad9Q8JZN5 625 aaKnown RBP15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tspan14Q8QZY6 270 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Chst12Q99LL3 419 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gimap3Q99MI6 301 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Poc5Q9DBS8 558 aa15.84■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Zc3h7aE9PWW6 970 aaKnown RBP15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm10801F7C7Q0 168 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Klhl33G3UW92 533 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Speer4cG3UXD1 256 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm10354K7N6A0 256 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dusp8O09112 663 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ptp4a2O70274 167 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Apoa4P06728 395 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fgfr2P21803 821 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 GlrbP48168 496 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Serac1Q3U213 654 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nt5dc3Q3UHB1 546 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mtnr1aQ61184 353 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q8BHN7 327 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Haus3Q8QZX2 570 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nudt8Q9CR24 210 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cables1Q9ESJ1 568 aa15.83■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm5485A0A1D5RM98 91 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pgap3A2A559 320 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Adgrf2E9Q4J9 644 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gm17615E9Q9P2 165 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 2210016F16RikG3X8U3 338 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Il1rl1P14719 567 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmprss15P97435 1069 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Epas1P97481 874 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Psmb4P99026 264 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Gabpb1Q00420 383 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Eps8Q08509 821 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pyroxd1Q3TMV7 498 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Olfm4Q3UZZ4 505 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Scara3Q8C850 606 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Trim31Q8R0K2 507 aa15.83■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmem68Q9D850 329 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms