RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 DIAPH1O60610 1272 aaKnown RBP23.28■■□□□ 1.32
PHGDH-226ENST00000641756 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
PHGDH-226ENST00000641756 NME9Q86XW9 330 aa23.28■■□□□ 1.32
PHGDH-226ENST00000641756 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
PHGDH-226ENST00000641756 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
PHGDH-226ENST00000641756 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
PHGDH-226ENST00000641756 EDC4Q6P2E9 1401 aaKnown RBP23.28■■□□□ 1.32
PHGDH-226ENST00000641756 PPM1GO15355 546 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-226ENST00000641756 PLEKHF1Q96S99 279 aa23.27■■□□□ 1.32
PHGDH-226ENST00000641756 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
PHGDH-226ENST00000641756 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
PHGDH-226ENST00000641756 ZRANB1Q9UGI0 708 aa23.26■■□□□ 1.31
PHGDH-226ENST00000641756 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
PHGDH-226ENST00000641756 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-226ENST00000641756 POLKQ9UBT6 870 aa23.26■■□□□ 1.31
PHGDH-226ENST00000641756 PTPRUQ92729 1446 aa23.25■■□□□ 1.31
PHGDH-226ENST00000641756 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
PHGDH-226ENST00000641756 SLIT1O75093 1534 aa23.23■■□□□ 1.31
PHGDH-226ENST00000641756 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
PHGDH-226ENST00000641756 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
PHGDH-226ENST00000641756 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
PHGDH-226ENST00000641756 ARHGAP23Q9P227 1491 aa23.22■■□□□ 1.31
PHGDH-226ENST00000641756 FANCIQ9NVI1 1328 aa23.22■■□□□ 1.31
PHGDH-226ENST00000641756 TMPOP42166 694 aaKnown RBP23.21■■□□□ 1.31
PHGDH-226ENST00000641756 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
PHGDH-226ENST00000641756 AKAP12Q02952 1782 aa23.21■■□□□ 1.31
PHGDH-226ENST00000641756 NCBP3Q53F19 620 aaKnown RBP23.21■■□□□ 1.31
PHGDH-226ENST00000641756 EMILIN1Q9Y6C2 1016 aa23.21■■□□□ 1.31
PHGDH-226ENST00000641756 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
PHGDH-226ENST00000641756 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
PHGDH-226ENST00000641756 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
PHGDH-226ENST00000641756 COG3Q96JB2 828 aa23.18■■□□□ 1.3
PHGDH-226ENST00000641756 MYH16Q9H6N6 1097 aa23.18■■□□□ 1.3
PHGDH-226ENST00000641756 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
PHGDH-226ENST00000641756 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
PHGDH-226ENST00000641756 SKAP1Q86WV1 359 aa23.17■■□□□ 1.3
PHGDH-226ENST00000641756 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
PHGDH-226ENST00000641756 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
PHGDH-226ENST00000641756 RIPK4P57078 832 aa23.15■■□□□ 1.3
PHGDH-226ENST00000641756 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
PHGDH-226ENST00000641756 TSR2Q969E8 191 aaKnown RBP23.15■■□□□ 1.3
PHGDH-226ENST00000641756 TBX22Q9Y458 520 aa23.15■■□□□ 1.3
PHGDH-226ENST00000641756 MSH5O43196 834 aa23.15■■□□□ 1.3
PHGDH-226ENST00000641756 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
PHGDH-226ENST00000641756 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
PHGDH-226ENST00000641756 TCERG1O14776 1098 aaKnown RBP23.14■■□□□ 1.3
PHGDH-226ENST00000641756 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.3
PHGDH-226ENST00000641756 PNNQ9H307 717 aaKnown RBP23.14■■□□□ 1.3
PHGDH-226ENST00000641756 ACEP12821 1306 aa23.14■■□□□ 1.29
PHGDH-226ENST00000641756 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
PHGDH-226ENST00000641756 FCHSD2O94868 740 aa23.14■■□□□ 1.29
PHGDH-226ENST00000641756 PRKAR2BP31323 418 aa23.14■■□□□ 1.29
PHGDH-226ENST00000641756 PANK1Q8TE04 598 aa23.13■■□□□ 1.29
PHGDH-226ENST00000641756 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
PHGDH-226ENST00000641756 HMOX1P09601 288 aa23.12■■□□□ 1.29
PHGDH-226ENST00000641756 AATKQ6ZMQ8 1374 aa23.12■■□□□ 1.29
PHGDH-226ENST00000641756 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
PHGDH-226ENST00000641756 TTC21BQ7Z4L5 1316 aa23.11■■□□□ 1.29
PHGDH-226ENST00000641756 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
PHGDH-226ENST00000641756 PLEKHG3A1L390 1219 aa23.1■■□□□ 1.29
PHGDH-226ENST00000641756 IL13P35225 146 aa23.1■■□□□ 1.29
PHGDH-226ENST00000641756 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-226ENST00000641756 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
PHGDH-226ENST00000641756 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
PHGDH-226ENST00000641756 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
PHGDH-226ENST00000641756 PTCH1Q13635 1447 aa23.09■■□□□ 1.29
PHGDH-226ENST00000641756 EXOSC9Q06265 439 aaKnown RBP23.08■■□□□ 1.29
PHGDH-226ENST00000641756 TNNQ9UQP3 1299 aa23.08■■□□□ 1.29
PHGDH-226ENST00000641756 DIP2AQ14689 1571 aa23.08■■□□□ 1.28
PHGDH-226ENST00000641756 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.28
PHGDH-226ENST00000641756 NEFMP07197 916 aa23.07■■□□□ 1.28
PHGDH-226ENST00000641756 PHACTR3Q96KR7 559 aa23.07■■□□□ 1.28
PHGDH-226ENST00000641756 USP6P35125 1406 aa23.07■■□□□ 1.28
PHGDH-226ENST00000641756 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
PHGDH-226ENST00000641756 IL16Q14005 1332 aa23.05■■□□□ 1.28
PHGDH-226ENST00000641756 MS4A1P11836 297 aa23.04■■□□□ 1.28
PHGDH-226ENST00000641756 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
PHGDH-226ENST00000641756 RLBP1P12271 317 aa23.03■■□□□ 1.28
PHGDH-226ENST00000641756 PDE4AP27815 886 aa23.03■■□□□ 1.28
PHGDH-226ENST00000641756 KCNA6P17658 529 aa23.03■■□□□ 1.28
PHGDH-226ENST00000641756 OVOS2A0A0J9YW53 1432 aa23.03■■□□□ 1.28
PHGDH-226ENST00000641756 OVOS2Q6IE36 1432 aa23.03■■□□□ 1.28
PHGDH-226ENST00000641756 RGPD8O14715 1765 aaPredicted RBP23.02■■□□□ 1.28
PHGDH-226ENST00000641756 NFE2L2Q16236 605 aa23.02■■□□□ 1.28
PHGDH-226ENST00000641756 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
PHGDH-226ENST00000641756 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
PHGDH-226ENST00000641756 SOX12O15370 315 aa23■■□□□ 1.27
PHGDH-226ENST00000641756 IGHDP01880 384 aa22.99■■□□□ 1.27
PHGDH-226ENST00000641756 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
PHGDH-226ENST00000641756 BACH2Q9BYV9 841 aa22.99■■□□□ 1.27
PHGDH-226ENST00000641756 SMC4Q9NTJ3 1288 aa22.99■■□□□ 1.27
PHGDH-226ENST00000641756 LAS1LQ9Y4W2 734 aaKnown RBP22.99■■□□□ 1.27
PHGDH-226ENST00000641756 SSH2Q76I76 1423 aa22.99■■□□□ 1.27
PHGDH-226ENST00000641756 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
PHGDH-226ENST00000641756 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
PHGDH-226ENST00000641756 SSH1Q8WYL5 1049 aa22.97■■□□□ 1.27
PHGDH-226ENST00000641756 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
PHGDH-226ENST00000641756 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
PHGDH-226ENST00000641756 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
PHGDH-226ENST00000641756 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms