RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
SAMMSON-218ENST00000641601 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
SAMMSON-218ENST00000641601 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
SAMMSON-218ENST00000641601 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
SAMMSON-218ENST00000641601 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
SAMMSON-218ENST00000641601 SEC24BO95487 1268 aa12.93□□□□□ -0.34
SAMMSON-218ENST00000641601 UPF2Q9HAU5 1272 aaKnown RBP12.93□□□□□ -0.34
SAMMSON-218ENST00000641601 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
SAMMSON-218ENST00000641601 DZIP1LQ8IYY4 767 aaKnown RBP12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
SAMMSON-218ENST00000641601 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
SAMMSON-218ENST00000641601 IDI1Q13907 227 aa12.91□□□□□ -0.34
SAMMSON-218ENST00000641601 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
SAMMSON-218ENST00000641601 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 FTSJ3Q8IY81 847 aaKnown RBP12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
SAMMSON-218ENST00000641601 SRPK2P78362 688 aaKnown RBP12.89□□□□□ -0.35
SAMMSON-218ENST00000641601 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
SAMMSON-218ENST00000641601 FYB1O15117 783 aa12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SAMMSON-218ENST00000641601 ARHGEF40Q8TER5 1519 aa12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 TRIM27P14373 513 aa12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
SAMMSON-218ENST00000641601 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
SAMMSON-218ENST00000641601 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
SAMMSON-218ENST00000641601 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
SAMMSON-218ENST00000641601 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
SAMMSON-218ENST00000641601 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 SMC5Q8IY18 1101 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 ATP7BP35670 1465 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 MLECQ14165 292 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 PRAM1Q96QH2 718 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 STK26Q9P289 416 aa12.85□□□□□ -0.35
SAMMSON-218ENST00000641601 FCHSD2O94868 740 aa12.84□□□□□ -0.35
SAMMSON-218ENST00000641601 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
SAMMSON-218ENST00000641601 POGKQ9P215 609 aa12.84□□□□□ -0.35
SAMMSON-218ENST00000641601 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.35
SAMMSON-218ENST00000641601 RIPK4P57078 832 aa12.83□□□□□ -0.35
SAMMSON-218ENST00000641601 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.35
SAMMSON-218ENST00000641601 MINK1Q8N4C8 1332 aaPredicted RBP12.83□□□□□ -0.35
SAMMSON-218ENST00000641601 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
SAMMSON-218ENST00000641601 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
SAMMSON-218ENST00000641601 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
SAMMSON-218ENST00000641601 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
SAMMSON-218ENST00000641601 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
SAMMSON-218ENST00000641601 ITPRIPQ8IWB1 547 aa12.82□□□□□ -0.36
SAMMSON-218ENST00000641601 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
SAMMSON-218ENST00000641601 CDK19Q9BWU1 502 aa12.81□□□□□ -0.36
SAMMSON-218ENST00000641601 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
SAMMSON-218ENST00000641601 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
SAMMSON-218ENST00000641601 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
SAMMSON-218ENST00000641601 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
SAMMSON-218ENST00000641601 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
SAMMSON-218ENST00000641601 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
SAMMSON-218ENST00000641601 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
SAMMSON-218ENST00000641601 AGLP35573 1532 aa12.79□□□□□ -0.36
SAMMSON-218ENST00000641601 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
SAMMSON-218ENST00000641601 NUCB1Q02818 461 aa12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 ARHGAP45Q92619 1136 aa12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 PTCH1Q13635 1447 aa12.78□□□□□ -0.36
SAMMSON-218ENST00000641601 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
SAMMSON-218ENST00000641601 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
SAMMSON-218ENST00000641601 A2ML1A8K2U0 1454 aa12.77□□□□□ -0.37
SAMMSON-218ENST00000641601 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
SAMMSON-218ENST00000641601 AATKQ6ZMQ8 1374 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms