RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
CASC19-230ENST00000641421 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
CASC19-230ENST00000641421 AMOTL2Q9Y2J4 779 aa13.95□□□□□ -0.18
CASC19-230ENST00000641421 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
CASC19-230ENST00000641421 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
CASC19-230ENST00000641421 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
CASC19-230ENST00000641421 PLIN1O60240 522 aa13.94□□□□□ -0.18
CASC19-230ENST00000641421 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
CASC19-230ENST00000641421 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
CASC19-230ENST00000641421 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
CASC19-230ENST00000641421 RRP7AQ9Y3A4 280 aaKnown RBP13.94□□□□□ -0.18
CASC19-230ENST00000641421 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
CASC19-230ENST00000641421 CEP170BQ9Y4F5 1589 aaPredicted RBP13.94□□□□□ -0.18
CASC19-230ENST00000641421 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
CASC19-230ENST00000641421 PTCH1Q13635 1447 aa13.93□□□□□ -0.18
CASC19-230ENST00000641421 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
CASC19-230ENST00000641421 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.93□□□□□ -0.18
CASC19-230ENST00000641421 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
CASC19-230ENST00000641421 ITSN1Q15811 1721 aa13.92□□□□□ -0.18
CASC19-230ENST00000641421 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
CASC19-230ENST00000641421 NME9Q86XW9 330 aa13.92□□□□□ -0.18
CASC19-230ENST00000641421 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
CASC19-230ENST00000641421 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
CASC19-230ENST00000641421 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
CASC19-230ENST00000641421 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
CASC19-230ENST00000641421 COG3Q96JB2 828 aa13.9□□□□□ -0.18
CASC19-230ENST00000641421 CRBNQ96SW2 442 aa13.9□□□□□ -0.18
CASC19-230ENST00000641421 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
CASC19-230ENST00000641421 PLEKHF1Q96S99 279 aa13.9□□□□□ -0.19
CASC19-230ENST00000641421 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
CASC19-230ENST00000641421 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
CASC19-230ENST00000641421 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
CASC19-230ENST00000641421 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
CASC19-230ENST00000641421 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
CASC19-230ENST00000641421 ACEP12821 1306 aa13.89□□□□□ -0.19
CASC19-230ENST00000641421 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
CASC19-230ENST00000641421 XRN1Q8IZH2 1706 aaKnown RBP13.88□□□□□ -0.19
CASC19-230ENST00000641421 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
CASC19-230ENST00000641421 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
CASC19-230ENST00000641421 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
CASC19-230ENST00000641421 FBLN1P23142 703 aa13.87□□□□□ -0.19
CASC19-230ENST00000641421 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
CASC19-230ENST00000641421 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
CASC19-230ENST00000641421 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
CASC19-230ENST00000641421 FCHSD2O94868 740 aa13.86□□□□□ -0.19
CASC19-230ENST00000641421 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
CASC19-230ENST00000641421 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
CASC19-230ENST00000641421 CDK12Q9NYV4 1490 aaPredicted RBP13.86□□□□□ -0.19
CASC19-230ENST00000641421 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
CASC19-230ENST00000641421 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
CASC19-230ENST00000641421 USP6P35125 1406 aa13.85□□□□□ -0.19
CASC19-230ENST00000641421 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
CASC19-230ENST00000641421 NRKQ7Z2Y5 1582 aa13.85□□□□□ -0.19
CASC19-230ENST00000641421 BCAR3O75815 825 aa13.84□□□□□ -0.19
CASC19-230ENST00000641421 NEFMP07197 916 aa13.84□□□□□ -0.19
CASC19-230ENST00000641421 KCNA6P17658 529 aa13.84□□□□□ -0.19
CASC19-230ENST00000641421 IL13P35225 146 aa13.83□□□□□ -0.2
CASC19-230ENST00000641421 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
CASC19-230ENST00000641421 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
CASC19-230ENST00000641421 IL16Q14005 1332 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 RIPK4P57078 832 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 RRS1Q15050 365 aaKnown RBP13.82□□□□□ -0.2
CASC19-230ENST00000641421 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 OVOS2A0A0J9YW53 1432 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 OVOS2Q6IE36 1432 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 ANKARQ7Z5J8 1434 aa13.82□□□□□ -0.2
CASC19-230ENST00000641421 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
CASC19-230ENST00000641421 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
CASC19-230ENST00000641421 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
CASC19-230ENST00000641421 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
CASC19-230ENST00000641421 RARSP54136 660 aaKnown RBP13.8□□□□□ -0.2
CASC19-230ENST00000641421 HMOX1P09601 288 aa13.8□□□□□ -0.2
CASC19-230ENST00000641421 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
CASC19-230ENST00000641421 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
CASC19-230ENST00000641421 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
CASC19-230ENST00000641421 SETD1BQ9UPS6 1966 aaKnown RBP13.79□□□□□ -0.2
CASC19-230ENST00000641421 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
CASC19-230ENST00000641421 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
CASC19-230ENST00000641421 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
CASC19-230ENST00000641421 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
CASC19-230ENST00000641421 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
CASC19-230ENST00000641421 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.2
CASC19-230ENST00000641421 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
CASC19-230ENST00000641421 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
CASC19-230ENST00000641421 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
CASC19-230ENST00000641421 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
CASC19-230ENST00000641421 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
CASC19-230ENST00000641421 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
CASC19-230ENST00000641421 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
CASC19-230ENST00000641421 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
CASC19-230ENST00000641421 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
CASC19-230ENST00000641421 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
CASC19-230ENST00000641421 KDM2BQ8NHM5 1336 aa13.73□□□□□ -0.21
CASC19-230ENST00000641421 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
CASC19-230ENST00000641421 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
CASC19-230ENST00000641421 PEAK1Q9H792 1746 aa13.72□□□□□ -0.21
CASC19-230ENST00000641421 SOX12O15370 315 aa13.72□□□□□ -0.21
CASC19-230ENST00000641421 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
CASC19-230ENST00000641421 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms