RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 DDIT3P35638 169 aa17.05■□□□□ 0.32
SCARB2-227ENST00000640957 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
SCARB2-227ENST00000640957 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
SCARB2-227ENST00000640957 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
SCARB2-227ENST00000640957 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
SCARB2-227ENST00000640957 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-227ENST00000640957 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
SCARB2-227ENST00000640957 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
SCARB2-227ENST00000640957 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
SCARB2-227ENST00000640957 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
SCARB2-227ENST00000640957 FBLN1P23142 703 aa17.03■□□□□ 0.32
SCARB2-227ENST00000640957 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
SCARB2-227ENST00000640957 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
SCARB2-227ENST00000640957 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.32
SCARB2-227ENST00000640957 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.31
SCARB2-227ENST00000640957 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.31
SCARB2-227ENST00000640957 GDPD2Q9HCC8 539 aa17.01■□□□□ 0.31
SCARB2-227ENST00000640957 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
SCARB2-227ENST00000640957 PLCH2O75038 1416 aa17.01■□□□□ 0.31
SCARB2-227ENST00000640957 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-227ENST00000640957 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
SCARB2-227ENST00000640957 PIK3C2GO75747 1445 aa17■□□□□ 0.31
SCARB2-227ENST00000640957 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
SCARB2-227ENST00000640957 CFAP53Q96M91 514 aa17■□□□□ 0.31
SCARB2-227ENST00000640957 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
SCARB2-227ENST00000640957 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
SCARB2-227ENST00000640957 GGNBP2Q9H3C7 697 aa16.99■□□□□ 0.31
SCARB2-227ENST00000640957 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
SCARB2-227ENST00000640957 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-227ENST00000640957 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
SCARB2-227ENST00000640957 SOX12O15370 315 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 NUCB1Q02818 461 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 SNX21Q969T3 373 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 CHD1O14646 1710 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
SCARB2-227ENST00000640957 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
SCARB2-227ENST00000640957 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-227ENST00000640957 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.31
SCARB2-227ENST00000640957 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCARB2-227ENST00000640957 FANCAO15360 1455 aa16.96■□□□□ 0.31
SCARB2-227ENST00000640957 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
SCARB2-227ENST00000640957 WDR63Q8IWG1 891 aa16.95■□□□□ 0.3
SCARB2-227ENST00000640957 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
SCARB2-227ENST00000640957 HDAC1Q13547 482 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-227ENST00000640957 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-227ENST00000640957 AAMPQ13685 434 aa16.94■□□□□ 0.3
SCARB2-227ENST00000640957 ZKSCAN5Q9Y2L8 839 aa16.94■□□□□ 0.3
SCARB2-227ENST00000640957 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-227ENST00000640957 TTC12Q9H892 705 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-227ENST00000640957 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
SCARB2-227ENST00000640957 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
SCARB2-227ENST00000640957 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
SCARB2-227ENST00000640957 KIF16BQ96L93 1317 aa16.92■□□□□ 0.3
SCARB2-227ENST00000640957 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
SCARB2-227ENST00000640957 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
SCARB2-227ENST00000640957 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
SCARB2-227ENST00000640957 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
SCARB2-227ENST00000640957 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
SCARB2-227ENST00000640957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCARB2-227ENST00000640957 TSPYL6Q8N831 410 aa16.9■□□□□ 0.3
SCARB2-227ENST00000640957 NOS1P29475 1434 aa16.9■□□□□ 0.3
SCARB2-227ENST00000640957 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
SCARB2-227ENST00000640957 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
SCARB2-227ENST00000640957 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-227ENST00000640957 BMP2KLQ5H9B9 411 aa16.89■□□□□ 0.29
SCARB2-227ENST00000640957 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
SCARB2-227ENST00000640957 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
SCARB2-227ENST00000640957 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 SIRT2Q8IXJ6 389 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 HMOX1P09601 288 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 ATP2B3Q16720 1220 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 USP25Q9UHP3 1055 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
SCARB2-227ENST00000640957 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SCARB2-227ENST00000640957 SASS6Q6UVJ0 657 aa16.87■□□□□ 0.29
SCARB2-227ENST00000640957 ZNF445P59923 1031 aa16.87■□□□□ 0.29
SCARB2-227ENST00000640957 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-227ENST00000640957 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
SCARB2-227ENST00000640957 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-227ENST00000640957 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 IDI1Q13907 227 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-227ENST00000640957 CDC45O75419 566 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-227ENST00000640957 VGLL3A8MV65 326 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-227ENST00000640957 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
SCARB2-227ENST00000640957 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
SCARB2-227ENST00000640957 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
SCARB2-227ENST00000640957 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
SCARB2-227ENST00000640957 ATP10AO60312 1499 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms