RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-225ENST00000640900 TOM1O60784 492 aa12.57□□□□□ -0.4
SCARB2-225ENST00000640900 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
SCARB2-225ENST00000640900 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
SCARB2-225ENST00000640900 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-225ENST00000640900 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-225ENST00000640900 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
SCARB2-225ENST00000640900 HDGFL2Q7Z4V5 671 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-225ENST00000640900 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
SCARB2-225ENST00000640900 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
SCARB2-225ENST00000640900 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
SCARB2-225ENST00000640900 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
SCARB2-225ENST00000640900 FOXO3O43524 673 aa12.55□□□□□ -0.4
SCARB2-225ENST00000640900 NGDNQ8NEJ9 315 aaKnown RBP12.55□□□□□ -0.4
SCARB2-225ENST00000640900 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
SCARB2-225ENST00000640900 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
SCARB2-225ENST00000640900 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
SCARB2-225ENST00000640900 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
SCARB2-225ENST00000640900 NSD2O96028 1365 aa12.54□□□□□ -0.4
SCARB2-225ENST00000640900 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
SCARB2-225ENST00000640900 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
SCARB2-225ENST00000640900 FYB1O15117 783 aa12.53□□□□□ -0.4
SCARB2-225ENST00000640900 ALS2Q96Q42 1657 aa12.53□□□□□ -0.4
SCARB2-225ENST00000640900 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
SCARB2-225ENST00000640900 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
SCARB2-225ENST00000640900 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
SCARB2-225ENST00000640900 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
SCARB2-225ENST00000640900 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
SCARB2-225ENST00000640900 PSME1Q06323 249 aa12.51□□□□□ -0.41
SCARB2-225ENST00000640900 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
SCARB2-225ENST00000640900 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
SCARB2-225ENST00000640900 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
SCARB2-225ENST00000640900 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
SCARB2-225ENST00000640900 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
SCARB2-225ENST00000640900 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-225ENST00000640900 ANKRD26Q9UPS8 1709 aa12.49□□□□□ -0.41
SCARB2-225ENST00000640900 TNS3Q68CZ2 1445 aa12.49□□□□□ -0.41
SCARB2-225ENST00000640900 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-225ENST00000640900 NME9Q86XW9 330 aa12.49□□□□□ -0.41
SCARB2-225ENST00000640900 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
SCARB2-225ENST00000640900 MED1Q15648 1581 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-225ENST00000640900 USP19O94966 1318 aa12.48□□□□□ -0.41
SCARB2-225ENST00000640900 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
SCARB2-225ENST00000640900 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-225ENST00000640900 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
SCARB2-225ENST00000640900 PRKRIP1Q9H875 184 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-225ENST00000640900 SLIT3O75094 1523 aa12.47□□□□□ -0.41
SCARB2-225ENST00000640900 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
SCARB2-225ENST00000640900 CRYBG1Q9Y4K1 1723 aa12.46□□□□□ -0.41
SCARB2-225ENST00000640900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCARB2-225ENST00000640900 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
SCARB2-225ENST00000640900 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
SCARB2-225ENST00000640900 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-225ENST00000640900 PIP4K2BP78356 416 aa12.45□□□□□ -0.42
SCARB2-225ENST00000640900 RALBP1Q15311 655 aa12.45□□□□□ -0.42
SCARB2-225ENST00000640900 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
SCARB2-225ENST00000640900 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
SCARB2-225ENST00000640900 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
SCARB2-225ENST00000640900 NFAT5O94916 1531 aa12.44□□□□□ -0.42
SCARB2-225ENST00000640900 ABTB2Q8N961 1025 aa12.44□□□□□ -0.42
SCARB2-225ENST00000640900 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-225ENST00000640900 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
SCARB2-225ENST00000640900 NLRP13Q86W25 1043 aa12.43□□□□□ -0.42
SCARB2-225ENST00000640900 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
SCARB2-225ENST00000640900 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
SCARB2-225ENST00000640900 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
SCARB2-225ENST00000640900 NLRP6P59044 892 aa12.42□□□□□ -0.42
SCARB2-225ENST00000640900 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
SCARB2-225ENST00000640900 COG3Q96JB2 828 aa12.42□□□□□ -0.42
SCARB2-225ENST00000640900 INSRP06213 1382 aa12.42□□□□□ -0.42
SCARB2-225ENST00000640900 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
SCARB2-225ENST00000640900 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
SCARB2-225ENST00000640900 ABCA3Q99758 1704 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 ZBTB22O15209 634 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 GCP02774 474 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-225ENST00000640900 MORC1Q86VD1 984 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 FBXO41Q8TF61 875 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 CPDO75976 1380 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
SCARB2-225ENST00000640900 ANP32CO43423 234 aa12.39□□□□□ -0.43
SCARB2-225ENST00000640900 HSPA1LP34931 641 aa12.39□□□□□ -0.43
SCARB2-225ENST00000640900 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
SCARB2-225ENST00000640900 JCADQ9P266 1359 aa12.39□□□□□ -0.43
SCARB2-225ENST00000640900 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
SCARB2-225ENST00000640900 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
SCARB2-225ENST00000640900 ARHGEF25Q86VW2 580 aa12.38□□□□□ -0.43
SCARB2-225ENST00000640900 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
SCARB2-225ENST00000640900 ABCC6O95255 1503 aa12.37□□□□□ -0.43
SCARB2-225ENST00000640900 FBLN1P23142 703 aa12.37□□□□□ -0.43
SCARB2-225ENST00000640900 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
SCARB2-225ENST00000640900 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
SCARB2-225ENST00000640900 COL18A1P39060 1754 aa12.36□□□□□ -0.43
SCARB2-225ENST00000640900 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-225ENST00000640900 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
SCARB2-225ENST00000640900 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-225ENST00000640900 MIER1Q8N108 512 aa12.36□□□□□ -0.43
SCARB2-225ENST00000640900 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
SCARB2-225ENST00000640900 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms