RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TRHP20396 242 aaPredicted RBP21.01■□□□□ 0.95
HNRNPU-228ENST00000640306 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
HNRNPU-228ENST00000640306 IDI1Q13907 227 aa21.01■□□□□ 0.95
HNRNPU-228ENST00000640306 TULP4Q9NRJ4 1543 aa21■□□□□ 0.95
HNRNPU-228ENST00000640306 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
HNRNPU-228ENST00000640306 RIPK4P57078 832 aa21■□□□□ 0.95
HNRNPU-228ENST00000640306 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
HNRNPU-228ENST00000640306 ANTXR1Q9H6X2 564 aa20.99■□□□□ 0.95
HNRNPU-228ENST00000640306 PPLO60437 1756 aa20.98■□□□□ 0.95
HNRNPU-228ENST00000640306 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
HNRNPU-228ENST00000640306 TMEM57Q8N5G2 664 aa20.98■□□□□ 0.95
HNRNPU-228ENST00000640306 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
HNRNPU-228ENST00000640306 GZF1Q9H116 711 aaPredicted RBP20.98■□□□□ 0.95
HNRNPU-228ENST00000640306 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
HNRNPU-228ENST00000640306 PRAM1Q96QH2 718 aa20.97■□□□□ 0.95
HNRNPU-228ENST00000640306 FYB1O15117 783 aa20.97■□□□□ 0.95
HNRNPU-228ENST00000640306 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
HNRNPU-228ENST00000640306 AAMPQ13685 434 aa20.96■□□□□ 0.95
HNRNPU-228ENST00000640306 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
HNRNPU-228ENST00000640306 SIGLEC1Q9BZZ2 1709 aa20.96■□□□□ 0.95
HNRNPU-228ENST00000640306 C22orf23Q9BZE7 217 aa20.96■□□□□ 0.95
HNRNPU-228ENST00000640306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.94■□□□□ 0.94
HNRNPU-228ENST00000640306 LNPKQ9C0E8 428 aa20.93■□□□□ 0.94
HNRNPU-228ENST00000640306 THUMPD2Q9BTF0 503 aaKnown RBP20.93■□□□□ 0.94
HNRNPU-228ENST00000640306 DDX19BQ9UMR2 479 aa20.93■□□□□ 0.94
HNRNPU-228ENST00000640306 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
HNRNPU-228ENST00000640306 DIAPH1O60610 1272 aaKnown RBP20.91■□□□□ 0.94
HNRNPU-228ENST00000640306 NSD2O96028 1365 aa20.91■□□□□ 0.94
HNRNPU-228ENST00000640306 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
HNRNPU-228ENST00000640306 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
HNRNPU-228ENST00000640306 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
HNRNPU-228ENST00000640306 HMOX1P09601 288 aa20.9■□□□□ 0.94
HNRNPU-228ENST00000640306 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
HNRNPU-228ENST00000640306 ARHGEF28Q8N1W1 1705 aaKnown RBP20.88■□□□□ 0.93
HNRNPU-228ENST00000640306 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
HNRNPU-228ENST00000640306 HDAC1Q13547 482 aaPredicted RBP20.88■□□□□ 0.93
HNRNPU-228ENST00000640306 PRKAR2BP31323 418 aa20.87■□□□□ 0.93
HNRNPU-228ENST00000640306 ZBTB40Q9NUA8 1239 aa20.87■□□□□ 0.93
HNRNPU-228ENST00000640306 USP32Q8NFA0 1604 aa20.87■□□□□ 0.93
HNRNPU-228ENST00000640306 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
HNRNPU-228ENST00000640306 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
HNRNPU-228ENST00000640306 ARHGAP31Q2M1Z3 1444 aa20.86■□□□□ 0.93
HNRNPU-228ENST00000640306 CT47B1P0C2W7 299 aaPredicted RBP20.86■□□□□ 0.93
HNRNPU-228ENST00000640306 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
HNRNPU-228ENST00000640306 PUS7Q96PZ0 661 aaKnown RBP20.85■□□□□ 0.93
HNRNPU-228ENST00000640306 ARHGEF40Q8TER5 1519 aa20.85■□□□□ 0.93
HNRNPU-228ENST00000640306 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
HNRNPU-228ENST00000640306 SMC5Q8IY18 1101 aa20.84■□□□□ 0.93
HNRNPU-228ENST00000640306 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
HNRNPU-228ENST00000640306 MCM4P33991 863 aa20.84■□□□□ 0.93
HNRNPU-228ENST00000640306 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
HNRNPU-228ENST00000640306 WAPLQ7Z5K2 1190 aa20.83■□□□□ 0.93
HNRNPU-228ENST00000640306 IPO8O15397 1037 aaKnown RBP20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 HSCBQ8IWL3 235 aa20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 FOXD4L1Q9NU39 408 aa20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 ESF1Q9H501 851 aaKnown RBP20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 AGLP35573 1532 aa20.82■□□□□ 0.92
HNRNPU-228ENST00000640306 ANKRD45Q5TZF3 282 aa20.81■□□□□ 0.92
HNRNPU-228ENST00000640306 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
HNRNPU-228ENST00000640306 KIF16BQ96L93 1317 aa20.81■□□□□ 0.92
HNRNPU-228ENST00000640306 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
HNRNPU-228ENST00000640306 SLC52A1Q9NWF4 448 aa20.81■□□□□ 0.92
HNRNPU-228ENST00000640306 ZMYM3Q14202 1370 aa20.8■□□□□ 0.92
HNRNPU-228ENST00000640306 ATAD2Q6PL18 1390 aa20.8■□□□□ 0.92
HNRNPU-228ENST00000640306 PANK2Q9BZ23 570 aa20.8■□□□□ 0.92
HNRNPU-228ENST00000640306 CHMP5Q9NZZ3 219 aa20.8■□□□□ 0.92
HNRNPU-228ENST00000640306 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
HNRNPU-228ENST00000640306 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
HNRNPU-228ENST00000640306 CHD1LQ86WJ1 897 aa20.79■□□□□ 0.92
HNRNPU-228ENST00000640306 EMILIN1Q9Y6C2 1016 aa20.79■□□□□ 0.92
HNRNPU-228ENST00000640306 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
HNRNPU-228ENST00000640306 NUCB1Q02818 461 aa20.79■□□□□ 0.92
HNRNPU-228ENST00000640306 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
HNRNPU-228ENST00000640306 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
HNRNPU-228ENST00000640306 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
HNRNPU-228ENST00000640306 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
HNRNPU-228ENST00000640306 IL16Q14005 1332 aa20.78■□□□□ 0.92
HNRNPU-228ENST00000640306 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
HNRNPU-228ENST00000640306 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.92
HNRNPU-228ENST00000640306 GOLGA6L3A6NEY3 463 aa20.77■□□□□ 0.91
HNRNPU-228ENST00000640306 TRAK2O60296 914 aa20.77■□□□□ 0.91
HNRNPU-228ENST00000640306 XRCC6P12956 609 aaKnown RBP eCLIP20.77■□□□□ 0.913e-19■□□□□ 9.8
HNRNPU-228ENST00000640306 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.91
HNRNPU-228ENST00000640306 PTPRMP28827 1452 aa20.77■□□□□ 0.91
HNRNPU-228ENST00000640306 FCHSD2O94868 740 aa20.76■□□□□ 0.91
HNRNPU-228ENST00000640306 L1TD1Q5T7N2 865 aaKnown RBP20.76■□□□□ 0.91
HNRNPU-228ENST00000640306 RRAGDQ9NQL2 400 aaPredicted RBP20.76■□□□□ 0.91
HNRNPU-228ENST00000640306 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
HNRNPU-228ENST00000640306 FAM83GA6ND36 823 aa20.74■□□□□ 0.91
HNRNPU-228ENST00000640306 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
HNRNPU-228ENST00000640306 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
HNRNPU-228ENST00000640306 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 ALDH1L2Q3SY69 923 aa20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 ZBTB7BO15156 539 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms