RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
SCN1B-208ENST00000640135 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
SCN1B-208ENST00000640135 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
SCN1B-208ENST00000640135 CCDC47Q96A33 483 aaKnown RBP13.42□□□□□ -0.26
SCN1B-208ENST00000640135 NUP160Q12769 1436 aa13.42□□□□□ -0.26
SCN1B-208ENST00000640135 HIP1O00291 1037 aa13.41□□□□□ -0.26
SCN1B-208ENST00000640135 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
SCN1B-208ENST00000640135 IDI1Q13907 227 aa13.41□□□□□ -0.26
SCN1B-208ENST00000640135 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
SCN1B-208ENST00000640135 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
SCN1B-208ENST00000640135 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
SCN1B-208ENST00000640135 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
SCN1B-208ENST00000640135 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
SCN1B-208ENST00000640135 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
SCN1B-208ENST00000640135 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
SCN1B-208ENST00000640135 AMOTQ4VCS5 1084 aa13.4□□□□□ -0.26
SCN1B-208ENST00000640135 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
SCN1B-208ENST00000640135 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
SCN1B-208ENST00000640135 TNRQ92752 1358 aa13.39□□□□□ -0.27
SCN1B-208ENST00000640135 RAD21O60216 631 aa13.39□□□□□ -0.27
SCN1B-208ENST00000640135 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
SCN1B-208ENST00000640135 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
SCN1B-208ENST00000640135 STARD3NLO95772 234 aa13.39□□□□□ -0.27
SCN1B-208ENST00000640135 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
SCN1B-208ENST00000640135 NFXL1Q6ZNB6 911 aa13.39□□□□□ -0.27
SCN1B-208ENST00000640135 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 GNAI2P04899 355 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 CNTROBQ8N137 903 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 PLCH2O75038 1416 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCN1B-208ENST00000640135 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 SURF6O75683 361 aaKnown RBP13.38□□□□□ -0.27
SCN1B-208ENST00000640135 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
SCN1B-208ENST00000640135 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
SCN1B-208ENST00000640135 TPM2P07951 284 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
SCN1B-208ENST00000640135 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
SCN1B-208ENST00000640135 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
SCN1B-208ENST00000640135 CCDC27Q2M243 656 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 PSMA5P28066 241 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
SCN1B-208ENST00000640135 HOOK1Q9UJC3 728 aaKnown RBP13.37□□□□□ -0.27
SCN1B-208ENST00000640135 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
SCN1B-208ENST00000640135 XBP1P17861 261 aa13.36□□□□□ -0.27
SCN1B-208ENST00000640135 PDE4AP27815 886 aa13.36□□□□□ -0.27
SCN1B-208ENST00000640135 TPD52L1Q16890 204 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-208ENST00000640135 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-208ENST00000640135 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
SCN1B-208ENST00000640135 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
SCN1B-208ENST00000640135 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
SCN1B-208ENST00000640135 GNAT3A8MTJ3 354 aa13.35□□□□□ -0.27
SCN1B-208ENST00000640135 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
SCN1B-208ENST00000640135 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
SCN1B-208ENST00000640135 MCTP1Q6DN14 999 aa13.35□□□□□ -0.27
SCN1B-208ENST00000640135 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCN1B-208ENST00000640135 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-208ENST00000640135 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 WAPLQ7Z5K2 1190 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
SCN1B-208ENST00000640135 TOM1O60784 492 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 CDC45O75419 566 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 BRMS1Q9HCU9 246 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
SCN1B-208ENST00000640135 LNPKQ9C0E8 428 aa13.33□□□□□ -0.27
SCN1B-208ENST00000640135 ZNF518AQ6AHZ1 1483 aa13.33□□□□□ -0.28
SCN1B-208ENST00000640135 CCDC57Q2TAC2 916 aa13.33□□□□□ -0.28
SCN1B-208ENST00000640135 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.28
SCN1B-208ENST00000640135 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
SCN1B-208ENST00000640135 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
SCN1B-208ENST00000640135 TPM3P06753 285 aa13.33□□□□□ -0.28
SCN1B-208ENST00000640135 TPM1P09493 284 aa13.33□□□□□ -0.28
SCN1B-208ENST00000640135 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.28
SCN1B-208ENST00000640135 WDR7Q9Y4E6 1490 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
SCN1B-208ENST00000640135 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 MSH6P52701 1360 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 NSD2O96028 1365 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 FOXO3O43524 673 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
SCN1B-208ENST00000640135 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 UHRF1BP1LA0JNW5 1464 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 GOLGA6L3A6NEY3 463 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
SCN1B-208ENST00000640135 ATP10BO94823 1461 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
SCN1B-208ENST00000640135 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 SMC3Q9UQE7 1217 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms