RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 POLR3AO14802 1390 aaPredicted RBP14.02□□□□□ -0.17
NECAP1-223ENST00000640091 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.17
NECAP1-223ENST00000640091 ATF3P18847 181 aa14.02□□□□□ -0.17
NECAP1-223ENST00000640091 COG3Q96JB2 828 aa14.02□□□□□ -0.17
NECAP1-223ENST00000640091 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.17
NECAP1-223ENST00000640091 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
NECAP1-223ENST00000640091 FOXO3O43524 673 aa14□□□□□ -0.17
NECAP1-223ENST00000640091 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
NECAP1-223ENST00000640091 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
NECAP1-223ENST00000640091 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-223ENST00000640091 PSME1Q06323 249 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-223ENST00000640091 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 ITSN1Q15811 1721 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 SOX12O15370 315 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
NECAP1-223ENST00000640091 SSH2Q76I76 1423 aa13.98□□□□□ -0.17
NECAP1-223ENST00000640091 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
NECAP1-223ENST00000640091 RRS1Q15050 365 aaKnown RBP13.97□□□□□ -0.17
NECAP1-223ENST00000640091 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
NECAP1-223ENST00000640091 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
NECAP1-223ENST00000640091 ABTB2Q8N961 1025 aa13.97□□□□□ -0.17
NECAP1-223ENST00000640091 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
NECAP1-223ENST00000640091 KIF20BQ96Q89 1820 aa13.96□□□□□ -0.17
NECAP1-223ENST00000640091 NLRP6P59044 892 aa13.96□□□□□ -0.17
NECAP1-223ENST00000640091 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
NECAP1-223ENST00000640091 MSH6P52701 1360 aa13.96□□□□□ -0.17
NECAP1-223ENST00000640091 NCOA3Q9Y6Q9 1424 aa13.96□□□□□ -0.18
NECAP1-223ENST00000640091 C1orf167Q5SNV9 1468 aa13.96□□□□□ -0.18
NECAP1-223ENST00000640091 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.18
NECAP1-223ENST00000640091 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.18
NECAP1-223ENST00000640091 DDX17Q92841 729 aaKnown RBP13.95□□□□□ -0.18
NECAP1-223ENST00000640091 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
NECAP1-223ENST00000640091 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
NECAP1-223ENST00000640091 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
NECAP1-223ENST00000640091 MST1RQ04912 1400 aa13.94□□□□□ -0.18
NECAP1-223ENST00000640091 NRKQ7Z2Y5 1582 aa13.94□□□□□ -0.18
NECAP1-223ENST00000640091 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
NECAP1-223ENST00000640091 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
NECAP1-223ENST00000640091 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
NECAP1-223ENST00000640091 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
NECAP1-223ENST00000640091 OVOS2A0A0J9YW53 1432 aa13.92□□□□□ -0.18
NECAP1-223ENST00000640091 OVOS2Q6IE36 1432 aa13.92□□□□□ -0.18
NECAP1-223ENST00000640091 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
NECAP1-223ENST00000640091 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
NECAP1-223ENST00000640091 AATKQ6ZMQ8 1374 aa13.91□□□□□ -0.18
NECAP1-223ENST00000640091 DCCP43146 1447 aa13.91□□□□□ -0.18
NECAP1-223ENST00000640091 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
NECAP1-223ENST00000640091 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
NECAP1-223ENST00000640091 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
NECAP1-223ENST00000640091 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
NECAP1-223ENST00000640091 USP31Q70CQ4 1352 aa13.9□□□□□ -0.18
NECAP1-223ENST00000640091 APAF1O14727 1248 aa13.9□□□□□ -0.18
NECAP1-223ENST00000640091 NUDCQ9Y266 331 aa13.9□□□□□ -0.18
NECAP1-223ENST00000640091 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
NECAP1-223ENST00000640091 MAP2P11137 1827 aaKnown RBP13.89□□□□□ -0.19
NECAP1-223ENST00000640091 MYT1Q01538 1121 aa13.88□□□□□ -0.19
NECAP1-223ENST00000640091 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
NECAP1-223ENST00000640091 BRINP3Q76B58 766 aa13.88□□□□□ -0.19
NECAP1-223ENST00000640091 INSRP06213 1382 aa13.88□□□□□ -0.19
NECAP1-223ENST00000640091 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
NECAP1-223ENST00000640091 MAP3K19Q56UN5 1328 aa13.87□□□□□ -0.19
NECAP1-223ENST00000640091 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
NECAP1-223ENST00000640091 SHPRHQ149N8 1683 aa13.87□□□□□ -0.19
NECAP1-223ENST00000640091 IL13P35225 146 aa13.86□□□□□ -0.19
NECAP1-223ENST00000640091 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
NECAP1-223ENST00000640091 AMPHP49418 695 aa13.85□□□□□ -0.19
NECAP1-223ENST00000640091 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
NECAP1-223ENST00000640091 HMOX1P09601 288 aa13.85□□□□□ -0.19
NECAP1-223ENST00000640091 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
NECAP1-223ENST00000640091 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
NECAP1-223ENST00000640091 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
NECAP1-223ENST00000640091 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
NECAP1-223ENST00000640091 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
NECAP1-223ENST00000640091 SMG6Q86US8 1419 aaKnown RBP13.84□□□□□ -0.19
NECAP1-223ENST00000640091 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
NECAP1-223ENST00000640091 GTF3C3Q9Y5Q9 886 aa13.84□□□□□ -0.19
NECAP1-223ENST00000640091 GCP02774 474 aa13.83□□□□□ -0.2
NECAP1-223ENST00000640091 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.2
NECAP1-223ENST00000640091 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
NECAP1-223ENST00000640091 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
NECAP1-223ENST00000640091 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
NECAP1-223ENST00000640091 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
NECAP1-223ENST00000640091 FCHSD2O94868 740 aa13.81□□□□□ -0.2
NECAP1-223ENST00000640091 HOXC9P31274 260 aa13.81□□□□□ -0.2
NECAP1-223ENST00000640091 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
NECAP1-223ENST00000640091 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
NECAP1-223ENST00000640091 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
NECAP1-223ENST00000640091 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
NECAP1-223ENST00000640091 FLT4P35916 1363 aa13.8□□□□□ -0.2
NECAP1-223ENST00000640091 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
NECAP1-223ENST00000640091 MARF1Q9Y4F3 1742 aaKnown RBP13.8□□□□□ -0.2
NECAP1-223ENST00000640091 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
NECAP1-223ENST00000640091 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
NECAP1-223ENST00000640091 SULT6B1Q6IMI4 303 aa13.79□□□□□ -0.2
NECAP1-223ENST00000640091 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
NECAP1-223ENST00000640091 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
NECAP1-223ENST00000640091 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
NECAP1-223ENST00000640091 SPATA31A3Q5VYP0 1347 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms