RNA–Protein interactions for RNA: ENST00000639342.1

PIGN-233, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-233	ENST00000639342	TAF7L	Q5H9L4	462 aa		9.36	□□□□□ -0.91
PIGN-233	ENST00000639342	KCNH5	Q8NCM2	988 aa		9.36	□□□□□ -0.91
PIGN-233	ENST00000639342	PHF14	O94880	888 aa		9.36	□□□□□ -0.91
PIGN-233	ENST00000639342	RUNDC1	Q96C34	613 aa		9.36	□□□□□ -0.91
PIGN-233	ENST00000639342	COG6	Q9Y2V7	657 aa		9.36	□□□□□ -0.91
PIGN-233	ENST00000639342	PRAG1	Q86YV5	1406 aa		9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	ROBO2	Q9HCK4	1378 aa		9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	KCNQ4	P56696	695 aa		9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	SCAF11	Q99590	1463 aa	Known RBP	9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	TPRN	Q4KMQ1	711 aa		9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	ZNF219	Q9P2Y4	722 aa	Predicted RBP	9.35	□□□□□ -0.91
PIGN-233	ENST00000639342	SHANK2	Q9UPX8	1470 aa		9.34	□□□□□ -0.91
PIGN-233	ENST00000639342	EXOSC9	Q06265	439 aa	Known RBP	9.34	□□□□□ -0.91
PIGN-233	ENST00000639342	CDC42BPA	Q5VT25	1732 aa		9.34	□□□□□ -0.91
PIGN-233	ENST00000639342	NPHP4	O75161	1426 aa	Predicted RBP	9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	PRDM15	P57071	1507 aa	Predicted RBP	9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	LMOD3	Q0VAK6	560 aa		9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	FRAT2	O75474	233 aa	Predicted RBP	9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	HECW2	Q9P2P5	1572 aa		9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	MAP3K19	Q56UN5	1328 aa		9.33	□□□□□ -0.92
PIGN-233	ENST00000639342	JARID2	Q92833	1246 aa	Predicted RBP	9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	CALD1	Q05682	793 aa	Known RBP	9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	PREX2	Q70Z35	1606 aa		9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	RIC3	Q7Z5B4	369 aa		9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	POLK	Q9UBT6	870 aa		9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	USP21	Q9UK80	565 aa		9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	C9orf78	Q9NZ63	289 aa	Predicted RBP	9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	SPG7	Q9UQ90	795 aa		9.32	□□□□□ -0.92
PIGN-233	ENST00000639342	ADGRL2	O95490	1459 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342		A0A1W2PP64	1363 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	BTBD11	A6QL63	1104 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342		G3V3G9	751 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	DDB1	Q16531	1140 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	DCAF8	Q5TAQ9	597 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	HDGFL1	Q5TGJ6	251 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	DIP2B	Q9P265	1576 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	PRR36	Q9H6K5	1346 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	FBXW7	Q969H0	707 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	MAGI2	Q86UL8	1455 aa		9.31	□□□□□ -0.92
PIGN-233	ENST00000639342	KRT24	Q2M2I5	525 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	PANK1	Q8TE04	598 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	PLA2R1	Q13018	1463 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	HSPA1L	P34931	641 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	GORAB	Q5T7V8	394 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	BRINP3	Q76B58	766 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	GAS2L2	Q8NHY3	880 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	PNISR	Q8TF01	805 aa	Known RBP	9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	C1orf115	Q9H7X2	142 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	TMOD3	Q9NYL9	352 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	CDC42BPB	Q9Y5S2	1711 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	ERVK-7	P63135	1459 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	BCAR3	O75815	825 aa		9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	SMG6	Q86US8	1419 aa	Known RBP	9.3	□□□□□ -0.92
PIGN-233	ENST00000639342	SLC4A2	P04920	1241 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	EIF4A2	Q14240	407 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	LARP1	Q6PKG0	1096 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	ISY1	Q9ULR0	285 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	LRPPRC	P42704	1394 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	SHROOM2	Q13796	1616 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	SETD1B	Q9UPS6	1966 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	PHACTR3	Q96KR7	559 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	EYA1	Q99502	592 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	CERK	Q8TCT0	537 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	MAST1	Q9Y2H9	1570 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	HSP90AA1	P07900	732 aa	Known RBP	9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	GPT	P24298	496 aa		9.29	□□□□□ -0.92
PIGN-233	ENST00000639342	IPO8	O15397	1037 aa	Known RBP	9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	TMPO	P42166	694 aa	Known RBP	9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	NFATC2IP	Q8NCF5	419 aa		9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	PTPRM	P28827	1452 aa		9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	QTRT2	Q9H974	415 aa	Known RBP	9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	EFCAB6	Q5THR3	1501 aa		9.28	□□□□□ -0.92
PIGN-233	ENST00000639342	TWISTNB	Q3B726	338 aa	Predicted RBP	9.27	□□□□□ -0.92
PIGN-233	ENST00000639342	CCDC24	Q8N4L8	307 aa		9.27	□□□□□ -0.92
PIGN-233	ENST00000639342	GNAT3	A8MTJ3	354 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	GNAI1	P63096	354 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	NEXN	Q0ZGT2	675 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	ZBTB3	Q9H5J0	574 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	NAP1L2	Q9ULW6	460 aa	Predicted RBP	9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	NBPF6	Q5VWK0	638 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	ZCRB1	Q8TBF4	217 aa	Known RBP	9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	NBPF4	Q96M43	638 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	ABCA9	Q8IUA7	1624 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	ABCC3	O15438	1527 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342	EXOC6	Q8TAG9	804 aa		9.27	□□□□□ -0.93
PIGN-233	ENST00000639342		F6X3S4	739 aa		9.26	□□□□□ -0.93
PIGN-233	ENST00000639342	TMX4	Q9H1E5	349 aa	Predicted RBP	9.26	□□□□□ -0.93
PIGN-233	ENST00000639342	LRRIQ1	Q96JM4	1722 aa		9.26	□□□□□ -0.93
PIGN-233	ENST00000639342	KDM5D	Q9BY66	1539 aa		9.26	□□□□□ -0.93
PIGN-233	ENST00000639342		E9PSI1	815 aa		9.26	□□□□□ -0.93
PIGN-233	ENST00000639342	HOXC9	P31274	260 aa		9.25	□□□□□ -0.93
PIGN-233	ENST00000639342	ARHGEF5	Q12774	1597 aa		9.25	□□□□□ -0.93
PIGN-233	ENST00000639342	PRIM1	P49642	420 aa	Known RBP	9.25	□□□□□ -0.93
PIGN-233	ENST00000639342	SIL1	Q9H173	461 aa		9.25	□□□□□ -0.93
PIGN-233	ENST00000639342	KIAA0232	Q92628	1395 aa		9.24	□□□□□ -0.93
PIGN-233	ENST00000639342	ATP5J2-PTCD1	G3V325	749 aa		9.24	□□□□□ -0.93
PIGN-233	ENST00000639342	KCNJ4	P48050	445 aa		9.24	□□□□□ -0.93
PIGN-233	ENST00000639342	MTHFSD	Q2M296	383 aa	Known RBP	9.24	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms