RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 TECPR2O15040 1411 aa11.68□□□□□ -0.54
NECAP1-217ENST00000639276 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
NECAP1-217ENST00000639276 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
NECAP1-217ENST00000639276 EID1Q9Y6B2 187 aa11.68□□□□□ -0.54
NECAP1-217ENST00000639276 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
NECAP1-217ENST00000639276 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
NECAP1-217ENST00000639276 MED14O60244 1454 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 ATP7BP35670 1465 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 ANKRD26Q9UPS8 1709 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 DIAPH1O60610 1272 aaKnown RBP11.67□□□□□ -0.54
NECAP1-217ENST00000639276 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
NECAP1-217ENST00000639276 FER1L4A9Z1Z3 1794 aa11.66□□□□□ -0.54
NECAP1-217ENST00000639276 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
NECAP1-217ENST00000639276 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-217ENST00000639276 CPS1P31327 1500 aa11.66□□□□□ -0.54
NECAP1-217ENST00000639276 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
NECAP1-217ENST00000639276 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
NECAP1-217ENST00000639276 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
NECAP1-217ENST00000639276 TMPOP42166 694 aaKnown RBP11.64□□□□□ -0.55
NECAP1-217ENST00000639276 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
NECAP1-217ENST00000639276 WDR63Q8IWG1 891 aa11.64□□□□□ -0.55
NECAP1-217ENST00000639276 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
NECAP1-217ENST00000639276 TSR2Q969E8 191 aaKnown RBP11.64□□□□□ -0.55
NECAP1-217ENST00000639276 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
NECAP1-217ENST00000639276 MAP2P11137 1827 aaKnown RBP11.64□□□□□ -0.55
NECAP1-217ENST00000639276 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
NECAP1-217ENST00000639276 HMOX1P09601 288 aa11.64□□□□□ -0.55
NECAP1-217ENST00000639276 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-217ENST00000639276 ACEP12821 1306 aa11.63□□□□□ -0.55
NECAP1-217ENST00000639276 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
NECAP1-217ENST00000639276 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-217ENST00000639276 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-217ENST00000639276 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
NECAP1-217ENST00000639276 PMFBP1Q8TBY8 1022 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 MSH5O43196 834 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 RIPK4P57078 832 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 COG3Q96JB2 828 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 ARHGAP23Q9P227 1491 aa11.62□□□□□ -0.55
NECAP1-217ENST00000639276 PRKAR2BP31323 418 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 RARSP54136 660 aaKnown RBP11.61□□□□□ -0.55
NECAP1-217ENST00000639276 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 ADGRB2O60241 1585 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 SLIT1O75093 1534 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 SOX12O15370 315 aa11.61□□□□□ -0.55
NECAP1-217ENST00000639276 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
NECAP1-217ENST00000639276 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
NECAP1-217ENST00000639276 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-217ENST00000639276 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
NECAP1-217ENST00000639276 KCNA6P17658 529 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
NECAP1-217ENST00000639276 IL13P35225 146 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 FCHSD2O94868 740 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 MON2Q7Z3U7 1717 aa11.59□□□□□ -0.55
NECAP1-217ENST00000639276 EXOSC9Q06265 439 aaKnown RBP11.58□□□□□ -0.55
NECAP1-217ENST00000639276 THUMPD2Q9BTF0 503 aaKnown RBP11.58□□□□□ -0.55
NECAP1-217ENST00000639276 MYH16Q9H6N6 1097 aa11.58□□□□□ -0.55
NECAP1-217ENST00000639276 AKAP12Q02952 1782 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 PLEKHG3A1L390 1219 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 RLBP1P12271 317 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 KDM2BQ8NHM5 1336 aa11.58□□□□□ -0.56
NECAP1-217ENST00000639276 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
NECAP1-217ENST00000639276 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
NECAP1-217ENST00000639276 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
NECAP1-217ENST00000639276 LAS1LQ9Y4W2 734 aaKnown RBP11.56□□□□□ -0.56
NECAP1-217ENST00000639276 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
NECAP1-217ENST00000639276 USP6P35125 1406 aa11.55□□□□□ -0.56
NECAP1-217ENST00000639276 IGHDP01880 384 aa11.55□□□□□ -0.56
NECAP1-217ENST00000639276 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
NECAP1-217ENST00000639276 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-217ENST00000639276 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
NECAP1-217ENST00000639276 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
NECAP1-217ENST00000639276 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
NECAP1-217ENST00000639276 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
NECAP1-217ENST00000639276 NUTM2GQ5VZR2 741 aa11.54□□□□□ -0.56
NECAP1-217ENST00000639276 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
NECAP1-217ENST00000639276 TOPAZ1Q8N9V7 1692 aa11.54□□□□□ -0.56
NECAP1-217ENST00000639276 CDK12Q9NYV4 1490 aaPredicted RBP11.54□□□□□ -0.56
NECAP1-217ENST00000639276 FAM83GA6ND36 823 aa11.54□□□□□ -0.56
NECAP1-217ENST00000639276 CENPQQ7L2Z9 268 aaPredicted RBP11.54□□□□□ -0.56
NECAP1-217ENST00000639276 PDE4AP27815 886 aa11.53□□□□□ -0.56
NECAP1-217ENST00000639276 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
NECAP1-217ENST00000639276 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
NECAP1-217ENST00000639276 SSH1Q8WYL5 1049 aa11.53□□□□□ -0.56
NECAP1-217ENST00000639276 PTCH1Q13635 1447 aa11.53□□□□□ -0.56
NECAP1-217ENST00000639276 DCTN1Q14203 1278 aa11.53□□□□□ -0.56
NECAP1-217ENST00000639276 DIP2AQ14689 1571 aa11.52□□□□□ -0.56
NECAP1-217ENST00000639276 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.56
NECAP1-217ENST00000639276 NEFMP07197 916 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 ANKLE2Q86XL3 938 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms