RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RHBDL3P58872 404 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 NFKBIBQ15653 356 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 JADE2Q9NQC1 790 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 NPHP1O15259 732 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 FMNL3Q8IVF7 1028 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 RAB11FIP3O75154 756 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 EEA1Q15075 1411 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 CHAF1AQ13111 956 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 MFSD4BQ5TF39 518 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CCAR1Q8IX12 1150 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 STK24Q9Y6E0 443 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 POU5F1Q01860 360 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 RETREG2Q8NC44 543 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ERBB3P21860 1342 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 SF3A1Q15459 793 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 TACO1Q9BSH4 297 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 RASSF4Q9H2L5 321 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CTDP1Q9Y5B0 961 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 KCNV2Q8TDN2 545 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ECM2O94769 699 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CHGAP10645 457 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ATP6V1AP38606 617 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 AP1ARQ63HQ0 302 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL10Q6JEL2 608 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 FAM200BP0CF97 657 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 BECN1Q14457 450 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 EVI5LQ96CN4 794 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 RSPH14Q9UHP6 348 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 PDCD2Q16342 344 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CWC25Q9NXE8 425 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 SYAP1Q96A49 352 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 NAP1L4Q99733 375 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CPSF2Q9P2I0 782 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 LCA5Q86VQ0 697 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 ANKRD20A12PQ8NF67 263 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 NOL10Q9BSC4 688 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CHMP4CQ96CF2 233 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 UQCRHLA0A096LP55 91 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 UQCRHP07919 91 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 PPP2R5AQ15172 486 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 JAKMIP3Q5VZ66 844 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 WWC2Q6AWC2 1192 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 SHTN1A0MZ66 631 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 PSMD2Q13200 908 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL23Q8NBE8 558 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KIF2CQ99661 725 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CSB-PGBD3P0DP91 1061 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 EP400NLQ6ZTU2 488 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 IQCGQ9H095 443 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 DNAJC5Q9H3Z4 198 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SWAP70Q9UH65 585 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL33A6NCF5 533 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 IBSPP21815 317 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC73Q6ZRK6 1079 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SENP3-EIF4A1A0A087X0R7 540 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 BICDL2A1A5D9 508 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC92Q53HC0 331 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SF3B2Q13435 895 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 MEX3CQ5U5Q3 659 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SLC24A3Q9HC58 644 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 FBXO9Q9UK97 447 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 COQ9O75208 318 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 DCAF11Q8TEB1 546 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC47Q96A33 483 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 TSR1Q2NL82 804 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IRAK4Q9NWZ3 460 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 PABPN1LA6NDY0 278 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TTLL5Q6EMB2 1281 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 MRE11P49959 708 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SESN3P58005 492 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 CACTIN-AS1Q8N1I8 211 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 RGL2O15211 777 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 FILIP1LQ4L180 1135 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TRIM29Q14134 588 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 OFD1O75665 1012 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 HDLBPQ00341 1268 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 RBBP5Q15291 538 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 INF2Q27J81 1249 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SUFUQ9UMX1 484 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 C1orf131Q8NDD1 294 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TBC1D22AQ8WUA7 517 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 MPP4Q96JB8 637 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TEX13AQ9BXU3 409 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IL16Q14005 1332 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IRX1P78414 480 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-209ENST00000639244 MAP2K2P36507 400 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ZC3H4Q9UPT8 1303 aaKnown RBP5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ATICP31939 592 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 USP8P40818 1118 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ARHGEF10LQ9HCE6 1279 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 CD151P48509 253 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 MCM6Q14566 821 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 VPS37AQ8NEZ2 397 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 C17orf50Q8WW18 174 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms