RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 CSPP1Q1MSJ5 1256 aa7.49□□□□□ -1.21
ATM-228ENST00000639240 TPRNQ4KMQ1 711 aa7.49□□□□□ -1.21
ATM-228ENST00000639240 F12P00748 615 aaPredicted RBP7.48□□□□□ -1.21
ATM-228ENST00000639240 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
ATM-228ENST00000639240 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
ATM-228ENST00000639240 MAP10Q9P2G4 905 aa7.48□□□□□ -1.21
ATM-228ENST00000639240 C11orf95C9JLR9 678 aaPredicted RBP7.47□□□□□ -1.21
ATM-228ENST00000639240 FBXO31Q5XUX0 539 aaPredicted RBP7.47□□□□□ -1.21
ATM-228ENST00000639240 ZNF511Q8NB15 262 aa7.47□□□□□ -1.21
ATM-228ENST00000639240 TLL2Q9Y6L7 1015 aa7.47□□□□□ -1.21
ATM-228ENST00000639240 LILRB3O75022 631 aa7.46□□□□□ -1.22
ATM-228ENST00000639240 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
ATM-228ENST00000639240 RTL5Q5HYW3 569 aaPredicted RBP7.46□□□□□ -1.22
ATM-228ENST00000639240 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
ATM-228ENST00000639240 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
ATM-228ENST00000639240 CTHP32929 405 aa7.44□□□□□ -1.22
ATM-228ENST00000639240 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
ATM-228ENST00000639240 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
ATM-228ENST00000639240 FOXJ1Q92949 421 aa7.44□□□□□ -1.22
ATM-228ENST00000639240 NFX1Q12986 1120 aaKnown RBP7.43□□□□□ -1.22
ATM-228ENST00000639240 SUZ12Q15022 739 aaKnown RBP7.43□□□□□ -1.22
ATM-228ENST00000639240 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
ATM-228ENST00000639240 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
ATM-228ENST00000639240 BMP1P13497 986 aa7.42□□□□□ -1.22
ATM-228ENST00000639240 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
ATM-228ENST00000639240 GPBP1L1Q9HC44 474 aaPredicted RBP7.42□□□□□ -1.22
ATM-228ENST00000639240 POLR3EQ9NVU0 708 aa7.42□□□□□ -1.22
ATM-228ENST00000639240 VARSP26640 1264 aaKnown RBP7.41□□□□□ -1.22
ATM-228ENST00000639240 KLF16Q9BXK1 252 aaPredicted RBP7.41□□□□□ -1.22
ATM-228ENST00000639240 MPNDQ8N594 471 aa7.4□□□□□ -1.22
ATM-228ENST00000639240 WASF2Q9Y6W5 498 aa7.4□□□□□ -1.22
ATM-228ENST00000639240 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 CAPN5O15484 640 aaPredicted RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 CLK2P49760 499 aaKnown RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
ATM-228ENST00000639240 TSC1Q92574 1164 aa7.39□□□□□ -1.23
ATM-228ENST00000639240 CTDSPL2Q05D32 466 aa7.38□□□□□ -1.23
ATM-228ENST00000639240 NNTQ13423 1086 aa7.38□□□□□ -1.23
ATM-228ENST00000639240 PROCA1Q8NCQ7 364 aaPredicted RBP7.38□□□□□ -1.23
ATM-228ENST00000639240 FAM117AQ9C073 453 aa7.38□□□□□ -1.23
ATM-228ENST00000639240 PLEKHG3A1L390 1219 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 WFS1O76024 890 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 NR3C2P08235 984 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 TIMP2P16035 220 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 GRM5P41594 1212 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
ATM-228ENST00000639240 KDM4CQ9H3R0 1056 aa7.36□□□□□ -1.23
ATM-228ENST00000639240 TERTO14746 1132 aaKnown RBP7.35□□□□□ -1.23
ATM-228ENST00000639240 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
ATM-228ENST00000639240 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.35□□□□□ -1.23
ATM-228ENST00000639240 ADH1CP00326 375 aa7.34□□□□□ -1.23
ATM-228ENST00000639240 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
ATM-228ENST00000639240 FAM174AQ8TBP5 190 aa7.34□□□□□ -1.23
ATM-228ENST00000639240 LRRN4Q8WUT4 740 aa7.34□□□□□ -1.23
ATM-228ENST00000639240 C1QTNF2Q9BXJ5 285 aa7.34□□□□□ -1.23
ATM-228ENST00000639240 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
ATM-228ENST00000639240 ARID5BQ14865 1188 aa7.33□□□□□ -1.24
ATM-228ENST00000639240 SKIV2LQ15477 1246 aaKnown RBP7.33□□□□□ -1.24
ATM-228ENST00000639240 KIFC2Q96AC6 838 aa7.33□□□□□ -1.24
ATM-228ENST00000639240 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
ATM-228ENST00000639240 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
ATM-228ENST00000639240 INSM1Q01101 510 aaPredicted RBP7.32□□□□□ -1.24
ATM-228ENST00000639240 ITPKCQ96DU7 683 aa7.32□□□□□ -1.24
ATM-228ENST00000639240 SOBPA7XYQ1 873 aa7.31□□□□□ -1.24
ATM-228ENST00000639240 WIPF1O43516 503 aa7.31□□□□□ -1.24
ATM-228ENST00000639240 AGERQ15109 404 aa7.31□□□□□ -1.24
ATM-228ENST00000639240 SH3D19Q5HYK7 790 aa7.31□□□□□ -1.24
ATM-228ENST00000639240 MRPL14Q6P1L8 145 aaKnown RBP7.31□□□□□ -1.24
ATM-228ENST00000639240 BPHLQ86WA6 291 aaPredicted RBP7.31□□□□□ -1.24
ATM-228ENST00000639240 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
ATM-228ENST00000639240 ZIC2O95409 532 aaPredicted RBP7.3□□□□□ -1.24
ATM-228ENST00000639240 VEGFBP49765 207 aa7.3□□□□□ -1.24
ATM-228ENST00000639240 PPP2R2DQ66LE6 453 aa7.3□□□□□ -1.24
ATM-228ENST00000639240 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
ATM-228ENST00000639240 PURBQ96QR8 312 aaKnown RBP7.3□□□□□ -1.24
ATM-228ENST00000639240 OCSTAMPQ9BR26 566 aa7.3□□□□□ -1.24
ATM-228ENST00000639240 NR6A1Q15406 480 aa7.29□□□□□ -1.24
ATM-228ENST00000639240 NR5A1Q13285 461 aa7.28□□□□□ -1.24
ATM-228ENST00000639240 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
ATM-228ENST00000639240 TRMT44Q8IYL2 757 aaKnown RBP7.28□□□□□ -1.24
ATM-228ENST00000639240 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
ATM-228ENST00000639240 MAGEB6P1A0A0J9YX57 407 aa7.27□□□□□ -1.25
ATM-228ENST00000639240 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
ATM-228ENST00000639240 ERFEQ4G0M1 354 aa7.27□□□□□ -1.25
ATM-228ENST00000639240 ARMC2Q8NEN0 867 aa7.27□□□□□ -1.25
ATM-228ENST00000639240 HMX1Q9NP08 348 aaPredicted RBP7.27□□□□□ -1.25
ATM-228ENST00000639240 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
ATM-228ENST00000639240 FSHRP23945 695 aa7.26□□□□□ -1.25
ATM-228ENST00000639240 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
ATM-228ENST00000639240 CARD14Q9BXL6 1004 aa7.26□□□□□ -1.25
ATM-228ENST00000639240 MAP4K5Q9Y4K4 846 aa7.26□□□□□ -1.25
ATM-228ENST00000639240 NBPF14Q5TI25 921 aa7.25□□□□□ -1.25
ATM-228ENST00000639240 DDRGK1Q96HY6 314 aa7.25□□□□□ -1.25
ATM-228ENST00000639240 FKBPLQ9UIM3 349 aa7.25□□□□□ -1.25
ATM-228ENST00000639240 H3BM21 787 aa7.24□□□□□ -1.25
ATM-228ENST00000639240 GMPRP36959 345 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms