RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 FYB1O15117 783 aa12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 DCCP43146 1447 aa12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 MST1RQ04912 1400 aa12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 C1orf167Q5SNV9 1468 aa12.34□□□□□ -0.43
HNRNPU-218ENST00000639064 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
HNRNPU-218ENST00000639064 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-218ENST00000639064 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
HNRNPU-218ENST00000639064 USP6P35125 1406 aa12.34□□□□□ -0.43
HNRNPU-218ENST00000639064 MYBBP1AQ9BQG0 1328 aaKnown RBP12.33□□□□□ -0.43
HNRNPU-218ENST00000639064 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.44
HNRNPU-218ENST00000639064 TNNT2P45379 298 aaPredicted RBP12.33□□□□□ -0.44
HNRNPU-218ENST00000639064 NME9Q86XW9 330 aa12.33□□□□□ -0.44
HNRNPU-218ENST00000639064 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
HNRNPU-218ENST00000639064 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
HNRNPU-218ENST00000639064 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
HNRNPU-218ENST00000639064 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
HNRNPU-218ENST00000639064 FOXO3O43524 673 aa12.32□□□□□ -0.44
HNRNPU-218ENST00000639064 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
HNRNPU-218ENST00000639064 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
HNRNPU-218ENST00000639064 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
HNRNPU-218ENST00000639064 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
HNRNPU-218ENST00000639064 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
HNRNPU-218ENST00000639064 NSD2O96028 1365 aa12.3□□□□□ -0.44
HNRNPU-218ENST00000639064 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-218ENST00000639064 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
HNRNPU-218ENST00000639064 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
HNRNPU-218ENST00000639064 PSME1Q06323 249 aa12.29□□□□□ -0.44
HNRNPU-218ENST00000639064 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
HNRNPU-218ENST00000639064 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-218ENST00000639064 FBLN1P23142 703 aa12.28□□□□□ -0.44
HNRNPU-218ENST00000639064 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.44
HNRNPU-218ENST00000639064 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.44
HNRNPU-218ENST00000639064 ANKRD26Q9UPS8 1709 aa12.27□□□□□ -0.45
HNRNPU-218ENST00000639064 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.45
HNRNPU-218ENST00000639064 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
HNRNPU-218ENST00000639064 COG3Q96JB2 828 aa12.26□□□□□ -0.45
HNRNPU-218ENST00000639064 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
HNRNPU-218ENST00000639064 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
HNRNPU-218ENST00000639064 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
HNRNPU-218ENST00000639064 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 KRT28Q7Z3Y7 464 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 OVOS2A0A0J9YW53 1432 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 OVOS2Q6IE36 1432 aa12.25□□□□□ -0.45
HNRNPU-218ENST00000639064 MTHFSP49914 203 aa12.24□□□□□ -0.45
HNRNPU-218ENST00000639064 SOX12O15370 315 aa12.24□□□□□ -0.45
HNRNPU-218ENST00000639064 NLRP6P59044 892 aa12.24□□□□□ -0.45
HNRNPU-218ENST00000639064 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
HNRNPU-218ENST00000639064 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
HNRNPU-218ENST00000639064 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
HNRNPU-218ENST00000639064 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
HNRNPU-218ENST00000639064 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
HNRNPU-218ENST00000639064 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
HNRNPU-218ENST00000639064 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
HNRNPU-218ENST00000639064 TRPM3Q9HCF6 1732 aaPredicted RBP12.22□□□□□ -0.45
HNRNPU-218ENST00000639064 POLKQ9UBT6 870 aa12.22□□□□□ -0.45
HNRNPU-218ENST00000639064 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
HNRNPU-218ENST00000639064 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
HNRNPU-218ENST00000639064 PXDNQ92626 1479 aa12.21□□□□□ -0.46
HNRNPU-218ENST00000639064 MARF1Q9Y4F3 1742 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-218ENST00000639064 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-218ENST00000639064 AATKQ6ZMQ8 1374 aa12.19□□□□□ -0.46
HNRNPU-218ENST00000639064 ZBED9Q6R2W3 1325 aa12.19□□□□□ -0.46
HNRNPU-218ENST00000639064 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
HNRNPU-218ENST00000639064 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
HNRNPU-218ENST00000639064 SOS2Q07890 1332 aaPredicted RBP12.18□□□□□ -0.46
HNRNPU-218ENST00000639064 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 ALS2Q96Q42 1657 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
HNRNPU-218ENST00000639064 TOM1O60784 492 aa12.16□□□□□ -0.46
HNRNPU-218ENST00000639064 NHSL1Q5SYE7 1610 aa12.16□□□□□ -0.46
HNRNPU-218ENST00000639064 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
HNRNPU-218ENST00000639064 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■□□□ 13.5
HNRNPU-218ENST00000639064 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
HNRNPU-218ENST00000639064 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
HNRNPU-218ENST00000639064 UBAP1LF5GYI3 381 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 GCP02774 474 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 USP19O94966 1318 aa12.15□□□□□ -0.46
HNRNPU-218ENST00000639064 PEAK1Q9H792 1746 aa12.15□□□□□ -0.47
HNRNPU-218ENST00000639064 MED1Q15648 1581 aaPredicted RBP12.14□□□□□ -0.47
HNRNPU-218ENST00000639064 NFAT5O94916 1531 aa12.14□□□□□ -0.47
HNRNPU-218ENST00000639064 HSP90AB2PQ58FF8 381 aa12.14□□□□□ -0.47
HNRNPU-218ENST00000639064 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
HNRNPU-218ENST00000639064 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-218ENST00000639064 SLIT3O75094 1523 aa12.13□□□□□ -0.47
HNRNPU-218ENST00000639064 ZBTB7CA1YPR0 619 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms