RNA–Protein interactions for RNA: ENST00000639007.1

SPIN3-218, Transcript of spindlin family member 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SPIN3, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-218ENST00000639007 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 ZNF500O60304 480 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-218ENST00000639007 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 CDC45O75419 566 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPIN3-218ENST00000639007 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
SPIN3-218ENST00000639007 C9orf84Q5VXU9 1444 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 FIBPO43427 364 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
SPIN3-218ENST00000639007 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
SPIN3-218ENST00000639007 EIF4G3O43432 1585 aaKnown RBP12.63□□□□□ -0.39
SPIN3-218ENST00000639007 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
SPIN3-218ENST00000639007 RABEP1Q15276 862 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 ZRSR1Q15695 479 aaKnown RBP12.63□□□□□ -0.39
SPIN3-218ENST00000639007 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 ABCC5O15440 1437 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
SPIN3-218ENST00000639007 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
SPIN3-218ENST00000639007 ZSCAN20P17040 1043 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-218ENST00000639007 KIF14Q15058 1648 aa12.62□□□□□ -0.39
SPIN3-218ENST00000639007 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
SPIN3-218ENST00000639007 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
SPIN3-218ENST00000639007 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-218ENST00000639007 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
SPIN3-218ENST00000639007 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
SPIN3-218ENST00000639007 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
SPIN3-218ENST00000639007 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 SKIDA1Q1XH10 827 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 TEX35Q5T0J7 233 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 TRIM5Q9C035 493 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 ARHGAP5Q13017 1502 aa12.61□□□□□ -0.39
SPIN3-218ENST00000639007 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
SPIN3-218ENST00000639007 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
SPIN3-218ENST00000639007 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
SPIN3-218ENST00000639007 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
SPIN3-218ENST00000639007 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
SPIN3-218ENST00000639007 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPIN3-218ENST00000639007 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
SPIN3-218ENST00000639007 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
SPIN3-218ENST00000639007 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
SPIN3-218ENST00000639007 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
SPIN3-218ENST00000639007 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
SPIN3-218ENST00000639007 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
SPIN3-218ENST00000639007 NUP160Q12769 1436 aa12.58□□□□□ -0.39
SPIN3-218ENST00000639007 NRDCO43847 1150 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 SNX21Q969T3 373 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 TNNT1P13805 278 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 SRPK2P78362 688 aaKnown RBP12.58□□□□□ -0.4
SPIN3-218ENST00000639007 PKP1Q13835 747 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 REC8O95072 547 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
SPIN3-218ENST00000639007 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
SPIN3-218ENST00000639007 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
SPIN3-218ENST00000639007 VPS37CA5D8V6 355 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-218ENST00000639007 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
SPIN3-218ENST00000639007 ZNF445P59923 1031 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 TMEM63CQ9P1W3 806 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 DISP1Q96F81 1524 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
SPIN3-218ENST00000639007 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 GPATCH8Q9UKJ3 1502 aaKnown RBP12.56□□□□□ -0.4
SPIN3-218ENST00000639007 GPS2Q13227 327 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 GOLGA6L19H0YKK7 550 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
SPIN3-218ENST00000639007 KRT222Q8N1A0 295 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 LMBRD1Q9NUN5 540 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
SPIN3-218ENST00000639007 KIF3BO15066 747 aa12.55□□□□□ -0.4
SPIN3-218ENST00000639007 BECN2A8MW95 431 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
SPIN3-218ENST00000639007 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
SPIN3-218ENST00000639007 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
SPIN3-218ENST00000639007 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 TRIM27P14373 513 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 MTHFSP49914 203 aa12.54□□□□□ -0.4
SPIN3-218ENST00000639007 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 SLC4A10Q6U841 1118 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 GIMAP6Q6P9H5 292 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
SPIN3-218ENST00000639007 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms