RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 FOXO3O43524 673 aa17.5■□□□□ 0.39
SCN8A-215ENST00000638820 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
SCN8A-215ENST00000638820 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
SCN8A-215ENST00000638820 MED14O60244 1454 aa17.49■□□□□ 0.39
SCN8A-215ENST00000638820 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
SCN8A-215ENST00000638820 AMPHP49418 695 aa17.48■□□□□ 0.39
SCN8A-215ENST00000638820 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
SCN8A-215ENST00000638820 ATP7BP35670 1465 aa17.48■□□□□ 0.39
SCN8A-215ENST00000638820 CPS1P31327 1500 aa17.48■□□□□ 0.39
SCN8A-215ENST00000638820 CDCA7LQ96GN5 454 aa17.48■□□□□ 0.39
SCN8A-215ENST00000638820 POLR3AO14802 1390 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-215ENST00000638820 HMOX1P09601 288 aa17.46■□□□□ 0.39
SCN8A-215ENST00000638820 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
SCN8A-215ENST00000638820 RUNDC1Q96C34 613 aa17.46■□□□□ 0.39
SCN8A-215ENST00000638820 SETD1AO15047 1707 aaKnown RBP17.45■□□□□ 0.38
SCN8A-215ENST00000638820 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 TCP11L2Q8N4U5 519 aa17.45■□□□□ 0.38
SCN8A-215ENST00000638820 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
SCN8A-215ENST00000638820 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
SCN8A-215ENST00000638820 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-215ENST00000638820 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
SCN8A-215ENST00000638820 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
SCN8A-215ENST00000638820 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
SCN8A-215ENST00000638820 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
SCN8A-215ENST00000638820 CADPS2Q86UW7 1296 aa17.4■□□□□ 0.38
SCN8A-215ENST00000638820 USP6P35125 1406 aa17.39■□□□□ 0.38
SCN8A-215ENST00000638820 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-215ENST00000638820 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
SCN8A-215ENST00000638820 KNDC1Q76NI1 1749 aa17.39■□□□□ 0.37
SCN8A-215ENST00000638820 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-215ENST00000638820 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
SCN8A-215ENST00000638820 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
SCN8A-215ENST00000638820 MSH6P52701 1360 aa17.38■□□□□ 0.37
SCN8A-215ENST00000638820 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
SCN8A-215ENST00000638820 ZNF142P52746 1687 aaPredicted RBP17.37■□□□□ 0.37
SCN8A-215ENST00000638820 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
SCN8A-215ENST00000638820 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
SCN8A-215ENST00000638820 ZNF335Q9H4Z2 1342 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-215ENST00000638820 RIPK4P57078 832 aa17.36■□□□□ 0.37
SCN8A-215ENST00000638820 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
SCN8A-215ENST00000638820 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
SCN8A-215ENST00000638820 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
SCN8A-215ENST00000638820 SULT6B1Q6IMI4 303 aa17.34■□□□□ 0.37
SCN8A-215ENST00000638820 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
SCN8A-215ENST00000638820 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
SCN8A-215ENST00000638820 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
SCN8A-215ENST00000638820 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
SCN8A-215ENST00000638820 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.37
SCN8A-215ENST00000638820 E9PSI1 815 aa17.32■□□□□ 0.36
SCN8A-215ENST00000638820 FCHSD2O94868 740 aa17.32■□□□□ 0.36
SCN8A-215ENST00000638820 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
SCN8A-215ENST00000638820 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
SCN8A-215ENST00000638820 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
SCN8A-215ENST00000638820 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SCN8A-215ENST00000638820 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
SCN8A-215ENST00000638820 XRN1Q8IZH2 1706 aaKnown RBP17.29■□□□□ 0.36
SCN8A-215ENST00000638820 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
SCN8A-215ENST00000638820 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-215ENST00000638820 ITSN1Q15811 1721 aa17.29■□□□□ 0.36
SCN8A-215ENST00000638820 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
SCN8A-215ENST00000638820 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
SCN8A-215ENST00000638820 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
SCN8A-215ENST00000638820 KCNH5Q8NCM2 988 aa17.28■□□□□ 0.36
SCN8A-215ENST00000638820 PLIN1O60240 522 aa17.28■□□□□ 0.36
SCN8A-215ENST00000638820 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
SCN8A-215ENST00000638820 INSRP06213 1382 aa17.27■□□□□ 0.36
SCN8A-215ENST00000638820 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.36
SCN8A-215ENST00000638820 IL13P35225 146 aa17.27■□□□□ 0.35
SCN8A-215ENST00000638820 SLFN5Q08AF3 891 aa17.27■□□□□ 0.35
SCN8A-215ENST00000638820 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.35
SCN8A-215ENST00000638820 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
SCN8A-215ENST00000638820 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
SCN8A-215ENST00000638820 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
SCN8A-215ENST00000638820 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
SCN8A-215ENST00000638820 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
SCN8A-215ENST00000638820 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
SCN8A-215ENST00000638820 LMTK3Q96Q04 1460 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 FLT4P35916 1363 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 GCP02774 474 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
SCN8A-215ENST00000638820 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
SCN8A-215ENST00000638820 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
SCN8A-215ENST00000638820 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
SCN8A-215ENST00000638820 CABLES1Q8TDN4 633 aa17.23■□□□□ 0.35
SCN8A-215ENST00000638820 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
SCN8A-215ENST00000638820 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
SCN8A-215ENST00000638820 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
SCN8A-215ENST00000638820 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
SCN8A-215ENST00000638820 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
SCN8A-215ENST00000638820 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
SCN8A-215ENST00000638820 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
SCN8A-215ENST00000638820 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
SCN8A-215ENST00000638820 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
SCN8A-215ENST00000638820 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms