RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
HCG27-205ENST00000638546 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
HCG27-205ENST00000638546 ZNF142P52746 1687 aaPredicted RBP21.81■■□□□ 1.08
HCG27-205ENST00000638546 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
HCG27-205ENST00000638546 NCBP3Q53F19 620 aaKnown RBP21.8■■□□□ 1.08
HCG27-205ENST00000638546 NME9Q86XW9 330 aa21.8■■□□□ 1.08
HCG27-205ENST00000638546 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
HCG27-205ENST00000638546 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
HCG27-205ENST00000638546 E9PSI1 815 aa21.78■■□□□ 1.08
HCG27-205ENST00000638546 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
HCG27-205ENST00000638546 COG3Q96JB2 828 aa21.77■■□□□ 1.08
HCG27-205ENST00000638546 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
HCG27-205ENST00000638546 ACEP12821 1306 aa21.77■■□□□ 1.08
HCG27-205ENST00000638546 DIAPH1O60610 1272 aaKnown RBP21.77■■□□□ 1.07
HCG27-205ENST00000638546 KCNA6P17658 529 aa21.77■■□□□ 1.07
HCG27-205ENST00000638546 POLKQ9UBT6 870 aa21.77■■□□□ 1.07
HCG27-205ENST00000638546 U2SURPO15042 1029 aaKnown RBP21.76■■□□□ 1.07
HCG27-205ENST00000638546 WWC1Q8IX03 1113 aa21.76■■□□□ 1.07
HCG27-205ENST00000638546 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
HCG27-205ENST00000638546 IQSEC2Q5JU85 1478 aa21.75■■□□□ 1.07
HCG27-205ENST00000638546 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
HCG27-205ENST00000638546 AATKQ6ZMQ8 1374 aa21.75■■□□□ 1.07
HCG27-205ENST00000638546 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
HCG27-205ENST00000638546 ZRANB1Q9UGI0 708 aa21.74■■□□□ 1.07
HCG27-205ENST00000638546 AKAP12Q02952 1782 aa21.74■■□□□ 1.07
HCG27-205ENST00000638546 TTC21BQ7Z4L5 1316 aa21.74■■□□□ 1.07
HCG27-205ENST00000638546 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
HCG27-205ENST00000638546 PNNQ9H307 717 aaKnown RBP21.73■■□□□ 1.07
HCG27-205ENST00000638546 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
HCG27-205ENST00000638546 ITSN1Q15811 1721 aa21.72■■□□□ 1.07
HCG27-205ENST00000638546 WDR63Q8IWG1 891 aa21.72■■□□□ 1.07
HCG27-205ENST00000638546 SPINK5Q9NQ38 1064 aaPredicted RBP21.72■■□□□ 1.07
HCG27-205ENST00000638546 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
HCG27-205ENST00000638546 B4GALNT3Q6L9W6 998 aa21.71■■□□□ 1.07
HCG27-205ENST00000638546 NEUROD2Q15784 382 aa21.7■■□□□ 1.06
HCG27-205ENST00000638546 PLEKHF1Q96S99 279 aa21.7■■□□□ 1.06
HCG27-205ENST00000638546 USP6P35125 1406 aa21.7■■□□□ 1.06
HCG27-205ENST00000638546 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
HCG27-205ENST00000638546 PPM1GO15355 546 aaPredicted RBP21.69■■□□□ 1.06
HCG27-205ENST00000638546 FBLN1P23142 703 aa21.69■■□□□ 1.06
HCG27-205ENST00000638546 FBXO41Q8TF61 875 aa21.69■■□□□ 1.06
HCG27-205ENST00000638546 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
HCG27-205ENST00000638546 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
HCG27-205ENST00000638546 LMTK3Q96Q04 1460 aa21.68■■□□□ 1.06
HCG27-205ENST00000638546 NPHP4O75161 1426 aaPredicted RBP21.68■■□□□ 1.06
HCG27-205ENST00000638546 EMILIN1Q9Y6C2 1016 aa21.67■■□□□ 1.06
HCG27-205ENST00000638546 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
HCG27-205ENST00000638546 FCHSD2O94868 740 aa21.66■■□□□ 1.06
HCG27-205ENST00000638546 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
HCG27-205ENST00000638546 TTC21AQ8NDW8 1320 aa21.66■■□□□ 1.06
HCG27-205ENST00000638546 SSH2Q76I76 1423 aa21.66■■□□□ 1.06
HCG27-205ENST00000638546 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
HCG27-205ENST00000638546 CDK12Q9NYV4 1490 aaPredicted RBP21.65■■□□□ 1.06
HCG27-205ENST00000638546 HSPA2P54652 639 aa21.65■■□□□ 1.06
HCG27-205ENST00000638546 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
HCG27-205ENST00000638546 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
HCG27-205ENST00000638546 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.05
HCG27-205ENST00000638546 EXOC6Q8TAG9 804 aa21.64■■□□□ 1.05
HCG27-205ENST00000638546 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
HCG27-205ENST00000638546 PLIN1O60240 522 aa21.63■■□□□ 1.05
HCG27-205ENST00000638546 IL13P35225 146 aa21.63■■□□□ 1.05
HCG27-205ENST00000638546 CHD2O14647 1828 aaKnown RBP21.62■■□□□ 1.05
HCG27-205ENST00000638546 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
HCG27-205ENST00000638546 OVOS2A0A0J9YW53 1432 aa21.62■■□□□ 1.05
HCG27-205ENST00000638546 OVOS2Q6IE36 1432 aa21.62■■□□□ 1.05
HCG27-205ENST00000638546 RRS1Q15050 365 aaKnown RBP21.61■■□□□ 1.05
HCG27-205ENST00000638546 RSPH6AQ9H0K4 717 aa21.61■■□□□ 1.05
HCG27-205ENST00000638546 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
HCG27-205ENST00000638546 USP31Q70CQ4 1352 aa21.6■■□□□ 1.05
HCG27-205ENST00000638546 NEFMP07197 916 aa21.59■■□□□ 1.05
HCG27-205ENST00000638546 MAP2P11137 1827 aaKnown RBP21.59■■□□□ 1.05
HCG27-205ENST00000638546 FMN2Q9NZ56 1722 aa21.59■■□□□ 1.05
HCG27-205ENST00000638546 PRKAR2BP31323 418 aa21.58■■□□□ 1.04
HCG27-205ENST00000638546 TRIM35Q9UPQ4 493 aa21.58■■□□□ 1.04
HCG27-205ENST00000638546 RIPK4P57078 832 aa21.57■■□□□ 1.04
HCG27-205ENST00000638546 CRBNQ96SW2 442 aa21.57■■□□□ 1.04
HCG27-205ENST00000638546 IL16Q14005 1332 aa21.56■■□□□ 1.04
HCG27-205ENST00000638546 ADGRL3Q9HAR2 1447 aa21.55■■□□□ 1.04
HCG27-205ENST00000638546 HMOX1P09601 288 aa21.54■■□□□ 1.04
HCG27-205ENST00000638546 PHF8Q9UPP1 1060 aa21.54■■□□□ 1.04
HCG27-205ENST00000638546 C20orf194Q5TEA3 1177 aa21.53■■□□□ 1.04
HCG27-205ENST00000638546 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
HCG27-205ENST00000638546 BCAR3O75815 825 aa21.52■■□□□ 1.04
HCG27-205ENST00000638546 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
HCG27-205ENST00000638546 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
HCG27-205ENST00000638546 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.03
HCG27-205ENST00000638546 RGPD8O14715 1765 aaPredicted RBP21.51■■□□□ 1.03
HCG27-205ENST00000638546 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
HCG27-205ENST00000638546 C14orf37Q86TY3 774 aa21.51■■□□□ 1.03
HCG27-205ENST00000638546 PHACTR3Q96KR7 559 aa21.5■■□□□ 1.03
HCG27-205ENST00000638546 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
HCG27-205ENST00000638546 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
HCG27-205ENST00000638546 NLRP6P59044 892 aa21.49■■□□□ 1.03
HCG27-205ENST00000638546 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
HCG27-205ENST00000638546 PROSER2Q86WR7 435 aaPredicted RBP21.47■■□□□ 1.03
HCG27-205ENST00000638546 MAP3K19Q56UN5 1328 aa21.47■■□□□ 1.03
HCG27-205ENST00000638546 FANCIQ9NVI1 1328 aa21.47■■□□□ 1.03
HCG27-205ENST00000638546 STRCQ7RTU9 1775 aa21.47■■□□□ 1.03
HCG27-205ENST00000638546 SOX12O15370 315 aa21.47■■□□□ 1.03
HCG27-205ENST00000638546 HSP90AB2PQ58FF8 381 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms