RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 MYO3AQ8NEV4 1616 aa15.26■□□□□ 0.03
GFAP-228ENST00000638488 SBNO2Q9Y2G9 1366 aa15.25■□□□□ 0.03
GFAP-228ENST00000638488 ARHGAP31Q2M1Z3 1444 aa15.25■□□□□ 0.03
GFAP-228ENST00000638488 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
GFAP-228ENST00000638488 PTMSP20962 102 aa15.24■□□□□ 0.03
GFAP-228ENST00000638488 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
GFAP-228ENST00000638488 MYO5BQ9ULV0 1848 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 DMTNQ08495 405 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 PREX1Q8TCU6 1659 aa15.23■□□□□ 0.03
GFAP-228ENST00000638488 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
GFAP-228ENST00000638488 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
GFAP-228ENST00000638488 SRPK2P78362 688 aaKnown RBP15.22■□□□□ 0.03
GFAP-228ENST00000638488 HS1BP3Q53T59 392 aa15.22■□□□□ 0.03
GFAP-228ENST00000638488 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.03
GFAP-228ENST00000638488 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
GFAP-228ENST00000638488 ZNF521Q96K83 1311 aa15.21■□□□□ 0.03
GFAP-228ENST00000638488 DYNC1I1O14576 645 aa15.21■□□□□ 0.03
GFAP-228ENST00000638488 APAF1O14727 1248 aa15.21■□□□□ 0.03
GFAP-228ENST00000638488 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
GFAP-228ENST00000638488 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
GFAP-228ENST00000638488 IGHDP01880 384 aa15.19■□□□□ 0.02
GFAP-228ENST00000638488 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
GFAP-228ENST00000638488 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
GFAP-228ENST00000638488 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
GFAP-228ENST00000638488 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
GFAP-228ENST00000638488 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
GFAP-228ENST00000638488 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
GFAP-228ENST00000638488 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
GFAP-228ENST00000638488 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
GFAP-228ENST00000638488 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
GFAP-228ENST00000638488 TMEM131LA2VDJ0 1609 aa15.18■□□□□ 0.02
GFAP-228ENST00000638488 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
GFAP-228ENST00000638488 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
GFAP-228ENST00000638488 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
GFAP-228ENST00000638488 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
GFAP-228ENST00000638488 UQCRHLA0A096LP55 91 aa15.16■□□□□ 0.02
GFAP-228ENST00000638488 UQCRHP07919 91 aa15.16■□□□□ 0.02
GFAP-228ENST00000638488 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
GFAP-228ENST00000638488 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
GFAP-228ENST00000638488 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
GFAP-228ENST00000638488 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
GFAP-228ENST00000638488 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
GFAP-228ENST00000638488 DDIT3P35638 169 aa15.15■□□□□ 0.02
GFAP-228ENST00000638488 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
GFAP-228ENST00000638488 GBP4Q96PP9 640 aa15.15■□□□□ 0.02
GFAP-228ENST00000638488 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
GFAP-228ENST00000638488 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
GFAP-228ENST00000638488 KIF20AO95235 890 aa15.15■□□□□ 0.02
GFAP-228ENST00000638488 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
GFAP-228ENST00000638488 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
GFAP-228ENST00000638488 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
GFAP-228ENST00000638488 GTF2E1P29083 439 aaPredicted RBP15.14■□□□□ 0.01
GFAP-228ENST00000638488 MTHFSP49914 203 aa15.14■□□□□ 0.01
GFAP-228ENST00000638488 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
GFAP-228ENST00000638488 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
GFAP-228ENST00000638488 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
GFAP-228ENST00000638488 GTPBP4Q9BZE4 634 aaKnown RBP15.14■□□□□ 0.01
GFAP-228ENST00000638488 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
GFAP-228ENST00000638488 RRP7AQ9Y3A4 280 aaKnown RBP15.14■□□□□ 0.01
GFAP-228ENST00000638488 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
GFAP-228ENST00000638488 NOL7Q9UMY1 257 aaKnown RBP15.13■□□□□ 0.01
GFAP-228ENST00000638488 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
GFAP-228ENST00000638488 YTHDC2Q9H6S0 1430 aaKnown RBP15.13■□□□□ 0.01
GFAP-228ENST00000638488 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
GFAP-228ENST00000638488 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
GFAP-228ENST00000638488 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
GFAP-228ENST00000638488 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
GFAP-228ENST00000638488 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
GFAP-228ENST00000638488 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
GFAP-228ENST00000638488 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
GFAP-228ENST00000638488 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
GFAP-228ENST00000638488 MCM5P33992 734 aa15.11■□□□□ 0.01
GFAP-228ENST00000638488 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
GFAP-228ENST00000638488 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
GFAP-228ENST00000638488 A0A1W2PP64 1363 aa15.11■□□□□ 0.01
GFAP-228ENST00000638488 SASS6Q6UVJ0 657 aa15.1■□□□□ 0.01
GFAP-228ENST00000638488 PTPRMP28827 1452 aa15.1■□□□□ 0.01
GFAP-228ENST00000638488 C22orf23Q9BZE7 217 aa15.1■□□□□ 0.01
GFAP-228ENST00000638488 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
GFAP-228ENST00000638488 LETM1O95202 739 aaPredicted RBP15.09■□□□□ 0.01
GFAP-228ENST00000638488 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
GFAP-228ENST00000638488 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
GFAP-228ENST00000638488 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
GFAP-228ENST00000638488 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
GFAP-228ENST00000638488 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
GFAP-228ENST00000638488 AGLP35573 1532 aa15.08■□□□□ 0
GFAP-228ENST00000638488 RAB3GAP1Q15042 981 aa15.08■□□□□ 0
GFAP-228ENST00000638488 SMC5Q8IY18 1101 aa15.08■□□□□ 0
GFAP-228ENST00000638488 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
GFAP-228ENST00000638488 RIMS2Q9UQ26 1411 aa15.08■□□□□ 0
GFAP-228ENST00000638488 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
GFAP-228ENST00000638488 KIF13AQ9H1H9 1805 aa15.07■□□□□ 0
GFAP-228ENST00000638488 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
GFAP-228ENST00000638488 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
GFAP-228ENST00000638488 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
GFAP-228ENST00000638488 SNX21Q969T3 373 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms