RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 CLCN1P35523 988 aa10.88□□□□□ -0.67
SCARB2-209ENST00000638409 ADGBQ8N7X0 1667 aa10.88□□□□□ -0.67
SCARB2-209ENST00000638409 SREK1Q8WXA9 508 aaKnown RBP10.88□□□□□ -0.67
SCARB2-209ENST00000638409 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
SCARB2-209ENST00000638409 AGLP35573 1532 aa10.87□□□□□ -0.67
SCARB2-209ENST00000638409 PPP1R12CQ9BZL4 782 aa10.87□□□□□ -0.67
SCARB2-209ENST00000638409 BRPF3Q9ULD4 1205 aa10.87□□□□□ -0.67
SCARB2-209ENST00000638409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCARB2-209ENST00000638409 SIGLEC1Q9BZZ2 1709 aa10.86□□□□□ -0.67
SCARB2-209ENST00000638409 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
SCARB2-209ENST00000638409 ADGRL2O95490 1459 aa10.86□□□□□ -0.67
SCARB2-209ENST00000638409 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
SCARB2-209ENST00000638409 LIMD1Q9UGP4 676 aa10.86□□□□□ -0.67
SCARB2-209ENST00000638409 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-209ENST00000638409 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
SCARB2-209ENST00000638409 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
SCARB2-209ENST00000638409 A2MP01023 1474 aa10.85□□□□□ -0.67
SCARB2-209ENST00000638409 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
SCARB2-209ENST00000638409 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
SCARB2-209ENST00000638409 GNEQ9Y223 722 aaKnown RBP10.84□□□□□ -0.67
SCARB2-209ENST00000638409 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
SCARB2-209ENST00000638409 DHX29Q7Z478 1369 aaKnown RBP10.84□□□□□ -0.67
SCARB2-209ENST00000638409 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-209ENST00000638409 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
SCARB2-209ENST00000638409 BCL2L13Q9BXK5 485 aa10.83□□□□□ -0.68
SCARB2-209ENST00000638409 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-209ENST00000638409 ROCK1Q13464 1354 aa10.83□□□□□ -0.68
SCARB2-209ENST00000638409 PTPRKQ15262 1439 aa10.83□□□□□ -0.68
SCARB2-209ENST00000638409 NCOA1Q15788 1441 aa10.83□□□□□ -0.68
SCARB2-209ENST00000638409 DUOX2Q9NRD8 1548 aa10.83□□□□□ -0.68
SCARB2-209ENST00000638409 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
SCARB2-209ENST00000638409 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
SCARB2-209ENST00000638409 ZNF662Q6ZS27 426 aa10.82□□□□□ -0.68
SCARB2-209ENST00000638409 ADAMTSL3P82987 1691 aa10.82□□□□□ -0.68
SCARB2-209ENST00000638409 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
SCARB2-209ENST00000638409 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-209ENST00000638409 EIF2AK4Q9P2K8 1649 aaKnown RBP10.82□□□□□ -0.68
SCARB2-209ENST00000638409 ANKRD62A6NC57 917 aa10.8□□□□□ -0.68
SCARB2-209ENST00000638409 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
SCARB2-209ENST00000638409 ERBINQ96RT1 1412 aa10.8□□□□□ -0.68
SCARB2-209ENST00000638409 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
SCARB2-209ENST00000638409 TMEM259Q4ZIN3 620 aa10.79□□□□□ -0.68
SCARB2-209ENST00000638409 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
SCARB2-209ENST00000638409 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
SCARB2-209ENST00000638409 UCN2Q96RP3 112 aa10.78□□□□□ -0.68
SCARB2-209ENST00000638409 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
SCARB2-209ENST00000638409 TMED8Q6PL24 325 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-209ENST00000638409 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
SCARB2-209ENST00000638409 FAM135AQ9P2D6 1515 aa10.78□□□□□ -0.68
SCARB2-209ENST00000638409 ZNF526Q8TF50 670 aaPredicted RBP10.77□□□□□ -0.68
SCARB2-209ENST00000638409 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.68
SCARB2-209ENST00000638409 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.68
SCARB2-209ENST00000638409 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
SCARB2-209ENST00000638409 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
SCARB2-209ENST00000638409 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
SCARB2-209ENST00000638409 CDHR5Q9HBB8 845 aa10.77□□□□□ -0.69
SCARB2-209ENST00000638409 MAP3K13O43283 966 aa10.76□□□□□ -0.69
SCARB2-209ENST00000638409 PHLDB3Q6NSJ2 640 aa10.76□□□□□ -0.69
SCARB2-209ENST00000638409 DEPDC5O75140 1603 aa10.76□□□□□ -0.69
SCARB2-209ENST00000638409 VAC14Q08AM6 782 aa10.76□□□□□ -0.69
SCARB2-209ENST00000638409 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
SCARB2-209ENST00000638409 C8orf37Q96NL8 207 aa10.75□□□□□ -0.69
SCARB2-209ENST00000638409 MADDQ8WXG6 1647 aa10.75□□□□□ -0.69
SCARB2-209ENST00000638409 FER1L4A9Z1Z3 1794 aa10.75□□□□□ -0.69
SCARB2-209ENST00000638409 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-209ENST00000638409 ANKRD50Q9ULJ7 1429 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 MROH1Q8NDA8 1641 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCARB2-209ENST00000638409 MROH2AA6NES4 1674 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 KDM5DQ9BY66 1539 aa10.74□□□□□ -0.69
SCARB2-209ENST00000638409 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 KIF3BO15066 747 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 ITGAEP38570 1179 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 QPCTQ16769 361 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-209ENST00000638409 ATG7O95352 703 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
SCARB2-209ENST00000638409 UBXN4Q92575 508 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 NAIPQ13075 1403 aa10.73□□□□□ -0.69
SCARB2-209ENST00000638409 AP1G2O75843 785 aa10.72□□□□□ -0.69
SCARB2-209ENST00000638409 ZC3H6P61129 1189 aaKnown RBP10.72□□□□□ -0.69
SCARB2-209ENST00000638409 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
SCARB2-209ENST00000638409 ZC3H13Q5T200 1668 aaKnown RBP10.72□□□□□ -0.69
SCARB2-209ENST00000638409 GPR37L1O60883 481 aa10.72□□□□□ -0.69
SCARB2-209ENST00000638409 IRX6P78412 446 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-209ENST00000638409 RIMS1Q86UR5 1692 aaKnown RBP10.72□□□□□ -0.69
SCARB2-209ENST00000638409 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
SCARB2-209ENST00000638409 MLECQ14165 292 aa10.71□□□□□ -0.69
SCARB2-209ENST00000638409 NOL8Q76FK4 1167 aaKnown RBP10.71□□□□□ -0.69
SCARB2-209ENST00000638409 UNC13BO14795 1591 aa10.71□□□□□ -0.69
SCARB2-209ENST00000638409 PTPRMP28827 1452 aa10.71□□□□□ -0.69
SCARB2-209ENST00000638409 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
SCARB2-209ENST00000638409 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.7
SCARB2-209ENST00000638409 GGT6Q6P531 493 aa10.71□□□□□ -0.7
SCARB2-209ENST00000638409 STK32AQ8WU08 396 aa10.71□□□□□ -0.7
SCARB2-209ENST00000638409 CLTCQ00610 1675 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms